RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 ZNF385DQ9H6B1 395 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 AKTIPQ9H8T0 292 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 SLC40A1Q9NP59 571 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 RIC8BQ9NVN3 520 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 CPNE7Q9UBL6 633 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 TAC3Q9UHF0 121 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 PILRBQ9UKJ0 227 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 ZNF490Q9ULM2 529 aaPredicted RBP13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 DOLKQ9UPQ8 538 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 PCDHB11Q9Y5F2 797 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 H0YIV9 168 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 SLC28A1O00337 649 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 AQP9O43315 295 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 ULK1O75385 1050 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 PIAS2O75928 621 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 KIAA0754O94854 1291 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 PRR35P0CG20 571 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 SP9P0CG40 484 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 C1GALT1C1LP0DN25 315 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 CDH1P12830 882 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 LBPP18428 481 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 NCF2P19878 526 aaPredicted RBP13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 PSMB5P28074 263 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 ZNF33BQ06732 778 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 UBAP2LQ14157 1087 aaKnown RBP13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 SLBPQ14493 270 aaKnown RBP eCLIP13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 KIF19Q2TAC6 998 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 SGO1Q5FBB7 561 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 CATSPEREQ5SY80 951 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 FRG2Q64ET8 278 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 TMEM198Q66K66 360 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 NXPE4Q6UWF7 544 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 CHSY3Q70JA7 882 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 TRIM46Q7Z4K8 759 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 YTHDF3Q7Z739 585 aaKnown RBP13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 SLC9B2Q86UD5 537 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 AMIGO1Q86WK6 493 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 C17orf64Q86WR6 236 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 SFTPA2Q8IWL1 248 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 AVL9Q8NBF6 648 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 SELENOMQ8WWX9 145 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 CATSPER2Q96P56 530 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 FRG2BQ96QU4 278 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 CCDC106Q9BWC9 280 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 ELOVL6Q9H5J4 265 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 PELI2Q9HAT8 420 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 FARSBQ9NSD9 589 aaKnown RBP13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 TMEM74BQ9NUR3 256 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 OR6C2Q9NZP2 312 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 ARMCX1Q9P291 453 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 SNX11Q9Y5W9 270 aa13.97□□□□□ -0.17
ARHGEF40-208ENST00000557498 TDRD6O60522 2096 aaKnown RBP13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 SERTM1A2A2V5 107 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 FAM221BA6H8Z2 402 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 RGS14O43566 566 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 PRICKLE3O43900 615 aaPredicted RBP13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 CCNDBP1O95273 360 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 PDYNP01213 254 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 PEBP1P30086 187 aaKnown RBP13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 BNC1Q01954 994 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 LAPTM5Q13571 262 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 GPR18Q14330 331 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 KRT72Q14CN4 511 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 PLCL1Q15111 1095 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 ANGPT1Q15389 498 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 NR6A1Q15406 480 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 PAGE2BQ5JRK9 111 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 ICE2Q659A1 982 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 OGFOD2Q6N063 350 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 MED27Q6P2C8 311 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 Q6ZSR9 355 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 SYT12Q8IV01 421 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 RBM12BQ8IXT5 1001 aaKnown RBP13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 CPSF7Q8N684 471 aaKnown RBP13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 ZBTB44Q8NCP5 570 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 OR4E2Q8NGC2 313 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 WDR20Q8TBZ3 569 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 PIGKQ92643 395 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 MARK4Q96L34 752 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 HBEGFQ99075 208 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 ACAT2Q9BWD1 397 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 TWSG1Q9GZX9 223 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 SRMSQ9H3Y6 488 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 GEMIN8Q9NWZ8 242 aaKnown RBP13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 GIMAP2Q9UG22 337 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 G3BP2Q9UN86 482 aaKnown RBP13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 CCL27Q9Y4X3 112 aa13.96□□□□□ -0.17
ARHGEF40-208ENST00000557498 TMEM131Q92545 1883 aa13.95□□□□□ -0.18
ARHGEF40-208ENST00000557498 SPAG17Q6Q759 2223 aa13.95□□□□□ -0.18
ARHGEF40-208ENST00000557498 PIPSLA2A3N6 862 aa13.95□□□□□ -0.18
ARHGEF40-208ENST00000557498 CAPN14A8MX76 684 aa13.95□□□□□ -0.18
ARHGEF40-208ENST00000557498 LMO7DNF2Z398 122 aa13.95□□□□□ -0.18
ARHGEF40-208ENST00000557498 UBDO15205 165 aa13.95□□□□□ -0.18
ARHGEF40-208ENST00000557498 YY2O15391 372 aa13.95□□□□□ -0.18
ARHGEF40-208ENST00000557498 SDC3O75056 442 aa13.95□□□□□ -0.18
ARHGEF40-208ENST00000557498 ANXA6P08133 673 aa13.95□□□□□ -0.18
ARHGEF40-208ENST00000557498 CHRM5P08912 532 aaPredicted RBP13.95□□□□□ -0.18
ARHGEF40-208ENST00000557498 HOXD12P35452 270 aa13.95□□□□□ -0.18
ARHGEF40-208ENST00000557498 DPP6P42658 865 aa13.95□□□□□ -0.18
ARHGEF40-208ENST00000557498 ATP4BP51164 291 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms