RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 LAMB3Q13751 1172 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 SPARCL1Q14515 664 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 LINC00303Q3SY05 128 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 FAM209BQ5JX69 171 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 FAM83HQ6ZRV2 1179 aaPredicted RBP9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 PRSS42Q7Z5A4 293 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 ZNF605Q86T29 641 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 LINC00523Q86TU6 105 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 VASH2Q86V25 355 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 CFAP206Q8IYR0 622 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 OR13C4Q8NGS5 318 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 STYXQ8WUJ0 223 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 KIAA1191Q96A73 305 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 KIAA1143Q96AT1 154 aaPredicted RBP9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 CTRCQ99895 268 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 TMEM121Q9BTD3 319 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 NLE1Q9NVX2 485 aaPredicted RBP9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 SIDT1Q9NXL6 827 aaKnown RBP9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 CDC23Q9UJX2 597 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 PSMD13Q9UNM6 376 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 R3HDM2Q9Y2K5 976 aaKnown RBP9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 GPR52Q9Y2T5 361 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 COLEC10Q9Y6Z7 277 aa9.56□□□□□ -0.88
HNRNPC-228ENST00000557033 IGLV3-16A0A075B6K0 115 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 TRBV5-4A0A0C4DH59 114 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 A0A0U1RQJ8 604 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 TCRBV7S2A1N4TA0A589 114 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 B8ZZF3 427 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 H3BS24 57 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 ARHGAP6O43182 974 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 SGTAO43765 313 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 RASSF9O75901 435 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 STK17BO94768 372 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 AGR2O95994 175 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 GAS8O95995 478 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 FGF5P12034 268 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 LIFP15018 202 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 TPH1P17752 444 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 WT1P19544 449 aaPredicted RBP9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 NDUFS1P28331 727 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 MC4RP32245 332 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 LEPRP48357 1165 aaKnown RBP9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 PRLHRP49683 370 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 FOXM1Q08050 763 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 LY6DQ14210 128 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 TRIM25Q14258 630 aaKnown RBP9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 SKIDA1Q1XH10 827 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 EMC4Q5J8M3 183 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 SEL1L2Q5TEA6 688 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 CACHD1Q5VU97 1274 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 CAPRIN2Q6IMN6 1127 aaKnown RBP9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 ZNF449Q6P9G9 518 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 DET1Q7L5Y6 550 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 KMT5CQ86Y97 462 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 CARFQ8N187 725 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 ESX1Q8N693 406 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 NRG4Q8WWG1 115 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 RSC1A1Q92681 617 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 FOXRED1Q96CU9 486 aaPredicted RBP9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 CDKN2AIPNLQ96HQ2 116 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 SLC45A3Q96JT2 553 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 CATSPER2Q96P56 530 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 FCRL4Q96PJ5 515 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 ALS2CR12Q96Q35 445 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 OR6C1Q96RD1 312 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 CD180Q99467 661 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 WWP1Q9H0M0 922 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 VPS37BQ9H9H4 285 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 APMAPQ9HDC9 416 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 IMP3Q9NV31 184 aaKnown RBP9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 RIC8BQ9NVN3 520 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 HEBP2Q9Y5Z4 205 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 ATMQ13315 3056 aa9.55□□□□□ -0.88
HNRNPC-228ENST00000557033 A0A088AWK7 358 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 GOLGA6L3A6NEY3 463 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 MROH6A6NGR9 719 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 KPNA5O15131 536 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 LIASO43766 372 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 KIF1CO43896 1103 aaKnown RBP9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 SUN1O94901 812 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 AP2A2O94973 939 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 MT-ND3P03897 115 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 SLC35G4P0C7Q5 338 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 NELFEP18615 380 aaKnown RBP9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 ACRV1P26436 265 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 PBLDP30039 288 aaPredicted RBP9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 FDFT1P37268 417 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 CD151P48509 253 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 MC1RQ01726 317 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 CACNG1Q06432 222 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 RPA4Q13156 261 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 KRT33BQ14525 404 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 POU6F1Q14863 301 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 PLCL1Q15111 1095 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 RPS6KA1Q15418 735 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 OASLQ15646 514 aaKnown RBP9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 TBR1Q16650 682 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 C3orf36Q3SXR2 165 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 ZRANB3Q5FWF4 1079 aa9.54□□□□□ -0.88
HNRNPC-228ENST00000557033 IRGCQ6NXR0 463 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms