RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 APH1BQ8WW43 257 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 TPD52L3Q96J77 140 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 APOLD1Q96LR9 279 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 EBPLQ9BY08 206 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 RMND5AQ9H871 391 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 TM9SF3Q9HD45 589 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 TRPS1Q9UHF7 1281 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 ERVK-11Q9UQG0 969 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 ATP11BQ9Y2G3 1177 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 AIREO43918 545 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 UPK1BO75841 260 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 CLDN7O95471 211 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 CPSF4O95639 269 aaKnown RBP11.07□□□□□ -0.64
SRP54-213ENST00000556994 DLGAP3O95886 979 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 IL1RNP18510 177 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 SDC1P18827 310 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 ATF6P18850 670 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 FPR1P21462 350 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 CXCR4P61073 352 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 RHOAP61586 193 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 NPRL3Q12980 569 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 SF1Q15637 639 aaKnown RBP11.07□□□□□ -0.64
SRP54-213ENST00000556994 BCL2A1Q16548 175 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 ZXDCQ2QGD7 858 aaPredicted RBP11.07□□□□□ -0.64
SRP54-213ENST00000556994 PLEKHG6Q3KR16 790 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 ATAD3BQ5T9A4 648 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 KIAA1614Q5VZ46 1190 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 STEAP3Q658P3 488 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 CXorf57Q6NSI4 855 aaKnown RBP11.07□□□□□ -0.64
SRP54-213ENST00000556994 LINC00299Q6ZSB3 139 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 PRSS48Q7RTY5 328 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 TSPYL5Q86VY4 417 aaPredicted RBP11.07□□□□□ -0.64
SRP54-213ENST00000556994 ENTHD1Q8IYW4 607 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 BEND7Q8N7W2 519 aaPredicted RBP11.07□□□□□ -0.64
SRP54-213ENST00000556994 PSD4Q8NDX1 1056 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 CDC26Q8NHZ8 85 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 HSH2DQ96JZ2 352 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 KCNC2Q96PR1 638 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 GABARAPL1Q9H0R8 117 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 IL26Q9NPH9 171 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 MAN2B2Q9Y2E5 1009 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 CAB39Q9Y376 341 aaPredicted RBP11.07□□□□□ -0.64
SRP54-213ENST00000556994 LAMA2P24043 3122 aaKnown RBP11.07□□□□□ -0.64
SRP54-213ENST00000556994 SLC38A8A6NNN8 435 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 EVPLLA8MZ36 301 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 CLIC1O00299 241 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 WDR47O94967 919 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 KCNK2O95069 426 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 KCNK5O95279 499 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 KRT6AP02538 564 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 KRT6BP04259 564 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 ZDHHC11BP0C7U3 371 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 COL6A1P12109 1028 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 GADD45AP24522 165 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 AQP1P29972 269 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 KDELR2P33947 212 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 KRT6CP48668 564 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 FOXD4Q12950 439 aaPredicted RBP11.07□□□□□ -0.64
SRP54-213ENST00000556994 NFATC2Q13469 925 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 TAF1CQ15572 869 aaPredicted RBP11.07□□□□□ -0.64
SRP54-213ENST00000556994 GPRC6AQ5T6X5 926 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 RBFAQ8N0V3 343 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 ELMO1Q92556 727 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 PANX1Q96RD7 426 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 ELOVL6Q9H5J4 265 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 THUMPD1Q9NXG2 353 aaKnown RBP11.07□□□□□ -0.64
SRP54-213ENST00000556994 ARL15Q9NXU5 204 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 LHX3Q9UBR4 397 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 AP3M1Q9Y2T2 418 aa11.07□□□□□ -0.64
SRP54-213ENST00000556994 LOC100506127A0A0U1RQW1 187 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 A0A1W2PQ67 120 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 M0R082 166 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 PSMD11O00231 422 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 FPGTO14772 594 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 COCHO43405 550 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 DNTTP04053 509 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 GRK5P34947 590 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 NR4A2P43354 598 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 RPIAP49247 311 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 PCYT1AP49585 367 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 GATMP50440 423 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 NUDT6P53370 316 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 SMU1Q2TAY7 513 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 ZNF404Q494X3 552 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 CERS6Q6ZMG9 384 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 SYTL1Q8IYJ3 562 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 CLECL1Q8IZS7 167 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 CLIP4Q8N3C7 705 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 SKA2Q8WVK7 121 aaPredicted RBP11.06□□□□□ -0.64
SRP54-213ENST00000556994 LINC01599Q8WXQ3 324 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 COPS4Q9BT78 406 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 ITPAQ9BY32 194 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 REXO4Q9GZR2 422 aaKnown RBP11.06□□□□□ -0.64
SRP54-213ENST00000556994 ZFYVE1Q9HBF4 777 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 QPCTLQ9NXS2 382 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 ASIC5Q9NY37 505 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 CRLS1Q9UJA2 301 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 RNF6Q9Y252 685 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 TMED5Q9Y3A6 229 aa11.06□□□□□ -0.64
SRP54-213ENST00000556994 HSPE1-MOB4S4R3N1 261 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms