RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 HS3ST3B1Q9Y662 390 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 GTF3C1Q12789 2109 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 C17orf113A0A1B0GUU1 675 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 FOXO6A8MYZ6 492 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 GOLGA6L22H0YM25 854 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 BTN3A3O00478 584 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 MATN3O15232 486 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 ZSCAN9O15535 394 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-236ENST00000556220 HCRTR1O43613 425 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 PRAMEF2O60811 474 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 PMPCBO75439 489 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 RNF8O76064 485 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 ONECUT2O95948 504 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 PVRP15151 417 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 BMP7P18075 431 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 UGT1A4P22310 534 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 NDUFS1P28331 727 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 SERPINB6P35237 376 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 ARL4AP40617 200 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 GABRA4P48169 554 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 ZNF165P49910 485 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 CTSCP53634 463 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 YBX1P67809 324 aaKnown RBP6.56□□□□□ -1.36
ATXN3-236ENST00000556220 KRT33BQ14525 404 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 PCOLCEQ15113 449 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 DPYSL2Q16555 572 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 TUBB8Q3ZCM7 444 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 ATP13A5Q4VNC0 1218 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 KRTCAP3Q53RY4 240 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 CES4AQ5XG92 561 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 TLDC1Q6P9B6 456 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 Q71RC1 249 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-236ENST00000556220 CXXC5Q7LFL8 322 aaKnown RBP6.56□□□□□ -1.36
ATXN3-236ENST00000556220 OVCH1Q7RTY7 1134 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 MCOLN2Q8IZK6 566 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 RASGEF1AQ8N9B8 481 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 DNAAF3Q8N9W5 541 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 OR11G2Q8NGC1 345 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 GDAP1Q8TB36 358 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 THAP3Q8WTV1 239 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-236ENST00000556220 CA5BP1Q8WTZ4 195 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 LCN9Q8WX39 176 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 ZNF653Q96CK0 615 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 KCNC2Q96PR1 638 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 CSPG4P5Q96PW8 444 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 TUBGCP2Q9BSJ2 902 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 ADGRE3Q9BY15 652 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 PRDM14Q9GZV8 571 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 CHRNA10Q9GZZ6 450 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 WWP1Q9H0M0 922 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 SRMSQ9H3Y6 488 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 MRM3Q9HC36 420 aaKnown RBP6.56□□□□□ -1.36
ATXN3-236ENST00000556220 MAGEE1Q9HCI5 957 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 FAM60AQ9NP50 221 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 HAUS2Q9NVX0 235 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 MRPS2Q9Y399 296 aaKnown RBP6.56□□□□□ -1.36
ATXN3-236ENST00000556220 TTLL3Q9Y4R7 772 aa6.56□□□□□ -1.36
ATXN3-236ENST00000556220 TLN2Q9Y4G6 2542 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 ANK3Q12955 4377 aaKnown RBP6.55□□□□□ -1.36
ATXN3-236ENST00000556220 FBN1P35555 2871 aaKnown RBP6.55□□□□□ -1.36
ATXN3-236ENST00000556220 MGAT4DA6NG13 374 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 BTN3A1O00481 513 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 USP1O94782 785 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 ZRANB2O95218 330 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATXN3-236ENST00000556220 WDPCPO95876 746 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 HPP00738 406 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 MMP2P08253 660 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 MYBL2P10244 700 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 PIM1P11309 404 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-236ENST00000556220 IL1R2P27930 398 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 JAM2P57087 298 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 ERVFRD-1P60508 538 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 ADAM8P78325 824 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 CACNG1Q06432 222 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 ZIC1Q15915 447 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 RBBP7Q16576 425 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 SLC5A12Q1EHB4 618 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 BOLA3Q53S33 107 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 TMEM198Q66K66 360 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 ACAD10Q6JQN1 1059 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 TIGD7Q6NT04 549 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-236ENST00000556220 GALNT18Q6P9A2 607 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 NCCRP1Q6ZVX7 275 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-236ENST00000556220 TMEM200AQ86VY9 491 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 KBTBD2Q8IY47 623 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 ACVR1CQ8NER5 493 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 CCDC110Q8TBZ0 833 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 DTX3LQ8TDB6 740 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 BRIX1Q8TDN6 353 aaKnown RBP6.55□□□□□ -1.36
ATXN3-236ENST00000556220 PHF10Q8WUB8 498 aaKnown RBP6.55□□□□□ -1.36
ATXN3-236ENST00000556220 PSMF1Q92530 271 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 FATE1Q969F0 183 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATXN3-236ENST00000556220 FKBP10Q96AY3 582 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 SDCCAG3Q96C92 435 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 ARSGQ96EG1 525 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 MAGED4Q96JG8 741 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 SMR3AQ99954 134 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 ZNF559Q9BR84 538 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms