RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 FOXD2O60548 495 aaPredicted RBP10.65□□□□□ -0.7
TMEM260-208ENST00000555905 UBXN7O94888 489 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 CLDN9O95484 217 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 ENO1P06733 434 aaKnown RBP10.65□□□□□ -0.7
TMEM260-208ENST00000555905 TROVE2P10155 538 aaKnown RBP eCLIP10.65□□□□□ -0.7
TMEM260-208ENST00000555905 AMD1P17707 334 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 POLR2CP19387 275 aaPredicted RBP10.65□□□□□ -0.7
TMEM260-208ENST00000555905 MPSTP25325 297 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 CMPK1P30085 196 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 ARRB2P32121 409 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 GRK6P43250 576 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 GPR3P46089 330 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 RPL14P50914 215 aaKnown RBP10.65□□□□□ -0.7
TMEM260-208ENST00000555905 DUSP3P51452 185 aaPredicted RBP10.65□□□□□ -0.7
TMEM260-208ENST00000555905 SEC24CP53992 1094 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 EPHA4P54764 986 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 SH3BP2P78314 561 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 CBX1P83916 185 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 IRF8Q02556 426 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 SLC14A1Q13336 389 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 SF1Q15637 639 aaKnown RBP10.65□□□□□ -0.7
TMEM260-208ENST00000555905 CSRP2Q16527 193 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 XKR6Q5GH73 641 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 SH2D4BQ5SQS7 431 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 DMRTA1Q5VZB9 504 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 ICE2Q659A1 982 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 ZNF438Q7Z4V0 828 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 MILR1Q7Z6M3 343 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 CPLX4Q7Z7G2 160 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 SYVN1Q86TM6 617 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 MYLK4Q86YV6 388 aaPredicted RBP10.65□□□□□ -0.7
TMEM260-208ENST00000555905 HOMEZQ8IX15 550 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 ADGRF3Q8IZF5 1079 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 ZNF781Q8N8C0 355 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 OR52B6Q8NGF0 335 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 AGR3Q8TD06 166 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 SLC5A11Q8WWX8 675 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 NEIL2Q969S2 332 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 GRAMD1AQ96CP6 724 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 FAR2Q96K12 515 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 APOLD1Q96LR9 279 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 SORT1Q99523 831 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 NTMT1Q9BV86 223 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 EDEM2Q9BV94 578 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 ACAT2Q9BWD1 397 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 TBC1D10AQ9BXI6 508 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 EPB41L1Q9H4G0 881 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 SEMA4GQ9NTN9 838 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 HRASLS2Q9NWW9 162 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 KCNK4Q9NYG8 393 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 HCN4Q9Y3Q4 1203 aa10.65□□□□□ -0.7
TMEM260-208ENST00000555905 A0A1W2PPV9 198 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 OR5K3A6NET4 321 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 E7EQ34 232 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 SLCO1B7G3V0H7 640 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 BTN3A3O00478 584 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 PPP6CO00743 305 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 AZIN1O14977 448 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 FLRT2O43155 660 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 UGDHO60701 494 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 FKBP9O95302 570 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 CHEK2O96017 543 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 PROS1P07225 676 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 FGF4P08620 206 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 EBLN1P0CF75 366 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 KITP10721 976 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 HGFP14210 728 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 PNLIPP16233 465 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 TYRP1P17643 537 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 EPORP19235 508 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 HRH2P25021 359 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 PSMB5P28074 263 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 ALDH4A1P30038 563 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 HK2P52789 917 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 ERVPABLB-1P60509 514 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 ABATP80404 500 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 PRDX1Q06830 199 aaKnown RBP10.64□□□□□ -0.71
TMEM260-208ENST00000555905 PCDH1Q08174 1060 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 TRAF3Q13114 568 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 CHIT1Q13231 466 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 TBCCQ15814 346 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 AASDHQ4L235 1098 aaPredicted RBP10.64□□□□□ -0.71
TMEM260-208ENST00000555905 LIPJQ5W064 366 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 ATG9BQ674R7 924 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 NXPE4Q6UWF7 544 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 SLCO4C1Q6ZQN7 724 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 EFL1Q7Z2Z2 1120 aaKnown RBP10.64□□□□□ -0.71
TMEM260-208ENST00000555905 TMPRSS11BQ86T26 416 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 WDR75Q8IWA0 830 aaKnown RBP10.64□□□□□ -0.71
TMEM260-208ENST00000555905 CLYBLQ8N0X4 340 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 OR4F6Q8NGB9 312 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 OR2A1Q8NGT9 310 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 PIWIL2Q8TC59 973 aaKnown RBP10.64□□□□□ -0.71
TMEM260-208ENST00000555905 NAT6Q93015 286 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 PTCD3Q96EY7 689 aaKnown RBP10.64□□□□□ -0.71
TMEM260-208ENST00000555905 AHCYL2Q96HN2 611 aaKnown RBP10.64□□□□□ -0.71
TMEM260-208ENST00000555905 CDK15Q96Q40 435 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 FAM107BQ9H098 131 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 EHD1Q9H4M9 534 aa10.64□□□□□ -0.71
TMEM260-208ENST00000555905 PELI2Q9HAT8 420 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms