RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	LRRC56	Q8IYG6	542 aa	Predicted RBP	12.07	□□□□□ -0.48
ABCD4-223	ENST00000555904	TBC1D19	Q8N5T2	526 aa		12.07	□□□□□ -0.48
ABCD4-223	ENST00000555904	OR2A1	Q8NGT9	310 aa		12.07	□□□□□ -0.48
ABCD4-223	ENST00000555904	SLC5A11	Q8WWX8	675 aa		12.07	□□□□□ -0.48
ABCD4-223	ENST00000555904	ESAM	Q96AP7	390 aa		12.07	□□□□□ -0.48
ABCD4-223	ENST00000555904	TMEM237	Q96Q45	408 aa		12.07	□□□□□ -0.48
ABCD4-223	ENST00000555904	OR2A14	Q96R47	310 aa		12.07	□□□□□ -0.48
ABCD4-223	ENST00000555904	NUDT22	Q9BRQ3	303 aa		12.07	□□□□□ -0.48
ABCD4-223	ENST00000555904	RTKN	Q9BST9	563 aa		12.07	□□□□□ -0.48
ABCD4-223	ENST00000555904	MECR	Q9BV79	373 aa		12.07	□□□□□ -0.48
ABCD4-223	ENST00000555904	SEMA6C	Q9H3T2	930 aa		12.07	□□□□□ -0.48
ABCD4-223	ENST00000555904	C1GALT1	Q9NS00	363 aa		12.07	□□□□□ -0.48
ABCD4-223	ENST00000555904	INTS9	Q9NV88	658 aa	Known RBP	12.07	□□□□□ -0.48
ABCD4-223	ENST00000555904	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	12.07	□□□□□ -0.48
ABCD4-223	ENST00000555904	SPAAR	A0A1B0GVQ0	90 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904		A0A1W2PPV9	198 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904		A0A1W2PQM1	296 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904		H3BQF6	201 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	E2F3	O00716	465 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	TOX3	O15405	576 aa	Predicted RBP	12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	OTC	P00480	354 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	C9	P02748	559 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	RPS17	P08708	135 aa	Known RBP	12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	CHN1	P15882	459 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	NPPB	P16860	134 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	PEBP1	P30086	187 aa	Known RBP	12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	GRK3	P35626	688 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	CCR8	P51685	355 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	CCNG1	P51959	295 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	GFER	P55789	205 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	RSPO4	Q2I0M5	234 aa	Predicted RBP	12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	SNAP47	Q5SQN1	464 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	ZNF678	Q5SXM1	525 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	PHF19	Q5T6S3	580 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	CACHD1	Q5VU97	1274 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	GOLGA7	Q7Z5G4	137 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	TMPRSS11B	Q86T26	416 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	MYLK4	Q86YV6	388 aa	Predicted RBP	12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	FAM76A	Q8TAV0	307 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	MAGEB10	Q96LZ2	347 aa	Predicted RBP	12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	TMEM74	Q96NL1	305 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	TRMO	Q9BU70	441 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	C1QTNF3	Q9BXJ4	246 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	IPPK	Q9H8X2	491 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	ACTR8	Q9H981	624 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	PRM3	Q9NNZ6	103 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	SEMA4B	Q9NPR2	832 aa	Predicted RBP	12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	SOHLH2	Q9NX45	425 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	AKAP7	Q9P0M2	348 aa	Predicted RBP	12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	ANKMY1	Q9P2S6	941 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	PCTP	Q9UKL6	214 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	SNX7	Q9UNH6	387 aa		12.06	□□□□□ -0.48
ABCD4-223	ENST00000555904	KNL1	Q8NG31	2342 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	TMX2-CTNND1	H3BSU7	103 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	NTN3	O00634	580 aa	Predicted RBP	12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	TM4SF5	O14894	197 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	PRICKLE3	O43900	615 aa	Predicted RBP	12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	ZBTB11	O95625	1053 aa	Predicted RBP	12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	SERPINE1	P05121	402 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	FTH1P19	P0C7X4	201 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	DHRS4L1	P0CG22	281 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	CDH1	P12830	882 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	MAG	P20916	626 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	CXCR2	P25025	360 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	GRK2	P25098	689 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	MPST	P25325	297 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	SERPINB5	P36952	375 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	MLLT3	P42568	568 aa	Predicted RBP	12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	ATP1A2	P50993	1020 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	PPP1CA	P62136	330 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	IRF8	Q02556	426 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	CLC	Q05315	142 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	LCP2	Q13094	533 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	TRA2A	Q13595	282 aa	Known RBP eCLIP	12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	CHI3L2	Q15782	390 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	ZXDC	Q2QGD7	858 aa	Predicted RBP	12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	XKR6	Q5GH73	641 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	PAGE2B	Q5JRK9	111 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	TMTC4	Q5T4D3	741 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	ATG16L1	Q676U5	607 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	PRSS42	Q7Z5A4	293 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	TRIM73	Q86UV7	250 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	ALYREF	Q86V81	257 aa	Known RBP	12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	KMT5C	Q86Y97	462 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	RAB3IL1	Q8TBN0	382 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	MDM1	Q8TC05	714 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	ZNF483	Q8TF39	744 aa	Predicted RBP	12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	NEIL2	Q969S2	332 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	TCTN2	Q96GX1	697 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	CNDP1	Q96KN2	507 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	DEPDC7	Q96QD5	511 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	OR4K3	Q96R72	315 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	MAP3K3	Q99759	626 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	DPH7	Q9BTV6	452 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	PITPNM3	Q9BZ71	974 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	STRADB	Q9C0K7	418 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	DRC3	Q9H069	523 aa		12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	NOL11	Q9H8H0	719 aa	Known RBP	12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	EML4	Q9HC35	981 aa	Known RBP	12.05	□□□□□ -0.48
ABCD4-223	ENST00000555904	ASB1	Q9Y576	335 aa		12.05	□□□□□ -0.48

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