RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 E5RI56 91 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 GOLGA8TH3BQL2 631 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 EIF3FO00303 357 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 PRPF4O43172 522 aaKnown RBP eCLIP12.13□□□□□ -0.471e-7■□□□□ 8.5
HNRNPC-221ENST00000555883 AVILO75366 819 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 VPS26AO75436 327 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 USP1O94782 785 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 AGFG2O95081 481 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 CCNDBP1O95273 360 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 DDAH2O95865 285 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 CATP04040 527 aaKnown RBP12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 ENO3P13929 434 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 MCM3P25205 808 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 PSMB5P28074 263 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 CXCR5P32302 372 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 MAGEA3P43357 314 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 CLCN7P51798 805 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 VSX2P58304 361 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 RAPSNQ13702 412 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 PRTGQ2VWP7 1150 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 KLHL38Q2WGJ6 581 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 TUBB8Q3ZCM7 444 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 PLEKHN1Q494U1 663 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 GARNL3Q5VVW2 1013 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 FRMPD2BQ6IN97 320 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 KIRREL2Q6UWL6 708 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 CES3Q6UWW8 571 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 SSC4DQ8WTU2 575 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 SNRNP40Q96DI7 357 aaKnown RBP12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 PBKQ96KB5 322 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 PLCD4Q9BRC7 762 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 DPH7Q9BTV6 452 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 MFRPQ9BY79 579 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 ILKAPQ9H0C8 392 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 LRRC4CQ9HCJ2 640 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 ZNF304Q9HCX3 659 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 SLC6A20Q9NP91 592 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 CTSFQ9UBX1 484 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 ZNF282Q9UDV7 671 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 CDC14AQ9UNH5 594 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 RUVBL2Q9Y230 463 aaKnown RBP12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 CRYL1Q9Y2S2 319 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 PPP2R2CQ9Y2T4 447 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 NEU2Q9Y3R4 380 aa12.13□□□□□ -0.47
HNRNPC-221ENST00000555883 GFYI3L273 518 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 TXNDC9O14530 226 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 KRT14P02533 472 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 MPC1LP0DKB6 136 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 ERVK-10P10266 1014 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 EZRP15311 586 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 ITGA3P26006 1051 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 ABATP80404 500 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 OCA2Q04671 838 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 PRDX1Q06830 199 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 DHX34Q14147 1143 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 FASTKQ14296 549 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 PRR30Q53SZ7 412 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 ACSBG2Q5FVE4 666 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 AGAP7PQ5VUJ5 663 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 IRAK1BP1Q5VVH5 260 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 ZNF470Q6ECI4 717 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 ZNF425Q6IV72 752 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 FBXO42Q6P3S6 717 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 TTC27Q6P3X3 843 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 CASC4Q6P4E1 433 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 PAQR7Q86WK9 346 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 OR11G2Q8NGC1 345 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 CALML6Q8TD86 181 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 ASB11Q8WXH4 323 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 SERPINB12Q96P63 405 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 AGAP4Q96P64 663 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 WDR77Q9BQA1 342 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 LHPPQ9H008 270 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 MRPS30Q9NP92 439 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 ZC3H7BQ9UGR2 993 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 MED16Q9Y2X0 877 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 PCDHGA10Q9Y5H3 936 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 SHANK1Q9Y566 2161 aa12.12□□□□□ -0.47
HNRNPC-221ENST00000555883 SNRNP200O75643 2136 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 NUP210LQ5VU65 1888 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 LOC105369274A0A096LPK9 316 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 IGKV1-8A0A0C4DH67 115 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 LOC102723532A0A0G2JNH3 316 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 A0A0J9YVX5 310 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 WIPF3A6NGB9 483 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 E7ENX8 843 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 CBX6O95503 412 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 SLC16A8O95907 504 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 HPP00738 406 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 ZGLP1P0C6A0 271 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 FDXRP22570 491 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 HRH2P25021 359 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 RPA3P35244 121 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 COILP38432 576 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 SKIV2L2P42285 1042 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 OR1D4P47884 311 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 FNTAP49354 379 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 PNLIPRP1P54315 467 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 FOXL2P58012 376 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms