RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ZDHHC18Q9NUE0 388 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 ARL15Q9NXU5 204 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 EURLQ9NYK6 297 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 ANKMY1Q9P2S6 941 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 ADAMTS6Q9UKP5 1117 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 CXorf49A8MYA2 514 aaPredicted RBP11.62□□□□□ -0.55
SRP54-206ENST00000555317 MEN1O00255 615 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 PRICKLE3O43900 615 aaPredicted RBP11.62□□□□□ -0.55
SRP54-206ENST00000555317 ITGB2P05107 769 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 ENO2P09104 434 aaPredicted RBP11.62□□□□□ -0.55
SRP54-206ENST00000555317 STMN1P16949 149 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 CCND1P24385 295 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 IMPA1P29218 277 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 TAS2R39P59534 338 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 GPX6P59796 221 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 TBPL1P62380 186 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 GPS2Q13227 327 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 ZNF460Q14592 562 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 GRTP1Q5TC63 336 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 PRAMEF17Q5VTA0 474 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 ICE2Q659A1 982 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 FCRL6Q6DN72 434 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 C16orf46Q6P387 395 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 SPNS2Q8IVW8 549 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 IFT20Q8IY31 132 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 DSELQ8IZU8 1212 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 OR2A1Q8NGT9 310 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 RERGQ96A58 199 aaPredicted RBP11.62□□□□□ -0.55
SRP54-206ENST00000555317 LRFN5Q96NI6 719 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 CATSPER2Q96P56 530 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 RBBP8Q99708 897 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 C17orf62Q9BQA9 187 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 DPH7Q9BTV6 452 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 GPR87Q9BY21 358 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 SPRTNQ9H040 489 aaPredicted RBP11.62□□□□□ -0.55
SRP54-206ENST00000555317 SMYD2Q9NRG4 433 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 STOX2Q9P2F5 926 aaPredicted RBP11.62□□□□□ -0.55
SRP54-206ENST00000555317 NDOR1Q9UHB4 597 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 IL17BQ9UHF5 180 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 GPN3Q9UHW5 284 aaPredicted RBP11.62□□□□□ -0.55
SRP54-206ENST00000555317 DMGDHQ9UI17 866 aaKnown RBP11.62□□□□□ -0.55
SRP54-206ENST00000555317 RALYQ9UKM9 306 aaKnown RBP11.62□□□□□ -0.55
SRP54-206ENST00000555317 PDE10AQ9Y233 779 aa11.62□□□□□ -0.55
SRP54-206ENST00000555317 TLN1Q9Y490 2541 aaKnown RBP11.61□□□□□ -0.55
SRP54-206ENST00000555317 MDC1Q14676 2089 aaKnown RBP11.61□□□□□ -0.55
SRP54-206ENST00000555317 A0A1W2PPV9 198 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 NPEPPSL1A6NEC2 478 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 E7ENX8 843 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 GUCA1CO95843 209 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 TSPAN12O95859 305 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 EIF2S1P05198 315 aaKnown RBP11.61□□□□□ -0.55
SRP54-206ENST00000555317 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 PGGT1BP53609 377 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 ARSFP54793 590 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 VSX2P58304 361 aaPredicted RBP11.61□□□□□ -0.55
SRP54-206ENST00000555317 CYP4F2P78329 520 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 TAP2Q03519 686 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 PRDX1Q06830 199 aaKnown RBP11.61□□□□□ -0.55
SRP54-206ENST00000555317 CDC20Q12834 499 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 GRM7Q14831 915 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 UAP1Q16222 522 aaPredicted RBP11.61□□□□□ -0.55
SRP54-206ENST00000555317 PHKG1Q16816 387 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 YOD1Q5VVQ6 348 aaPredicted RBP11.61□□□□□ -0.55
SRP54-206ENST00000555317 PRAMEF13Q5VWM6 474 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 CAPN13Q6MZZ7 669 aaPredicted RBP11.61□□□□□ -0.55
SRP54-206ENST00000555317 FAM199XQ6PEV8 388 aaPredicted RBP11.61□□□□□ -0.55
SRP54-206ENST00000555317 AGTRAPQ6RW13 159 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 MBOAT1Q6ZNC8 495 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 RAPH1Q70E73 1250 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 ADAMTSL2Q86TH1 951 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 PROKR1Q8TCW9 393 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 PDLIM5Q96HC4 596 aaKnown RBP11.61□□□□□ -0.55
SRP54-206ENST00000555317 CYTH2Q99418 400 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 GPR22Q99680 433 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 EGFL8Q99944 293 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 ZFYVE21Q9BQ24 234 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 CHST8Q9H2A9 424 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 ACTL8Q9H568 366 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 CAB39LQ9H9S4 337 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 PCMTD2Q9NV79 361 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 CTNNAL1Q9UBT7 734 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 SNX7Q9UNH6 387 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 NOVA2Q9UNW9 492 aaKnown RBP11.61□□□□□ -0.55
SRP54-206ENST00000555317 PADI2Q9Y2J8 665 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 MTO1Q9Y2Z2 717 aaKnown RBP11.61□□□□□ -0.55
SRP54-206ENST00000555317 KLK4Q9Y5K2 254 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 MRPS18BQ9Y676 258 aaKnown RBP11.61□□□□□ -0.55
SRP54-206ENST00000555317 IKBKGQ9Y6K9 419 aa11.61□□□□□ -0.55
SRP54-206ENST00000555317 A0A0J9YVX5 310 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 NKX2-8O15522 239 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 SRPX2O60687 465 aaPredicted RBP11.6□□□□□ -0.55
SRP54-206ENST00000555317 ACSL3O95573 720 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 RHOXF2BP0C7M4 288 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 EZRP15311 586 aaKnown RBP11.6□□□□□ -0.55
SRP54-206ENST00000555317 WT1P19544 449 aaPredicted RBP11.6□□□□□ -0.55
SRP54-206ENST00000555317 ALAS2P22557 587 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 HRH2P25021 359 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 PTPN4P29074 926 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 RORAP35398 523 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 GRK3P35626 688 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms