RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 AGBL3Q8NEM8 1001 aa4.99□□□□□ -1.61
VRK1-203ENST00000555067 HM13Q8TCT9 377 aa4.99□□□□□ -1.61
VRK1-203ENST00000555067 ZNF570Q96NI8 536 aa4.99□□□□□ -1.61
VRK1-203ENST00000555067 FEVQ99581 238 aa4.99□□□□□ -1.61
VRK1-203ENST00000555067 TCHPQ9BT92 498 aa4.99□□□□□ -1.61
VRK1-203ENST00000555067 GTPBP2Q9BX10 602 aaKnown RBP4.99□□□□□ -1.61
VRK1-203ENST00000555067 FN3KQ9H479 309 aa4.99□□□□□ -1.61
VRK1-203ENST00000555067 RNPEPL1Q9HAU8 725 aa4.99□□□□□ -1.61
VRK1-203ENST00000555067 OR14J1Q9UGF5 321 aa4.99□□□□□ -1.61
VRK1-203ENST00000555067 SIX4Q9UIU6 781 aa4.99□□□□□ -1.61
VRK1-203ENST00000555067 C13orf42A0A1B0GVH6 325 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 FEZF1A0PJY2 475 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 MAP2K7O14733 419 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 HSPA12AO43301 675 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 LINC00271P0C7V0 271 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 PLA2G4BP0C869 781 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 AREGP15514 252 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 DDX5P17844 614 aaKnown RBP4.98□□□□□ -1.61
VRK1-203ENST00000555067 CDKN1AP38936 164 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 ASMTP46597 345 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 RBBP5Q15291 538 aaKnown RBP4.98□□□□□ -1.61
VRK1-203ENST00000555067 CCDC40Q4G0X9 1142 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 SIGIRRQ6IA17 410 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 ARMCX2Q7L311 632 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 CACNA2D4Q7Z3S7 1137 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 CCDC190Q86UF4 302 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 ZC3HC1Q86WB0 502 aaKnown RBP4.98□□□□□ -1.61
VRK1-203ENST00000555067 SFR1Q86XK3 245 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 UNC5CLQ8IV45 518 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 SIAH3Q8IW03 269 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 PM20D2Q8IYS1 436 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 BATF2Q8N1L9 274 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 BANPQ8N9N5 519 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 EXD1Q8NHP7 514 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 BBS10Q8TAM1 723 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 SLC5A11Q8WWX8 675 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 SPDL1Q96EA4 605 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 DTD2Q96FN9 168 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 PANX3Q96QZ0 392 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 SMC6Q96SB8 1091 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 CPNE1Q99829 537 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 THUMPD2Q9BTF0 503 aaKnown RBP4.98□□□□□ -1.61
VRK1-203ENST00000555067 CARD6Q9BX69 1037 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 ACPTQ9BZG2 426 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 CCSER1Q9C0I3 900 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 HINT3Q9NQE9 182 aaKnown RBP4.98□□□□□ -1.61
VRK1-203ENST00000555067 KLHL1Q9NR64 748 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 CYSLTR2Q9NS75 346 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 TBC1D7Q9P0N9 293 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 MTUS1Q9ULD2 1270 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 KCNK6Q9Y257 313 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 WDR37Q9Y2I8 494 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 NFE2L3Q9Y4A8 694 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 SNX9Q9Y5X1 595 aa4.98□□□□□ -1.61
VRK1-203ENST00000555067 NPHP3Q7Z494 1330 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 TRBV2A0A0J9YWF9 115 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 KANSL1LA0AUZ9 987 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 CFAP73A6NFT4 308 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 CTDSPLO15194 276 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 AP5Z1O43299 807 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 KLHL41O60662 606 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 FCGR3BO75015 233 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 RGS11O94810 467 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 OR6B1O95007 311 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 PGLSO95336 258 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 CLDN14O95500 239 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 CRYAAP02489 173 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 SERPING1P05155 500 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 GM2AP17900 193 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 HOXC9P31274 260 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 SMSP52788 366 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 ZBTB17Q13105 803 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 DMP1Q13316 513 aaPredicted RBP4.97□□□□□ -1.61
VRK1-203ENST00000555067 PDE7AQ13946 482 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 PPP6R3Q5H9R7 873 aaPredicted RBP4.97□□□□□ -1.61
VRK1-203ENST00000555067 LRRC73Q5JTD7 316 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 NSUN5P2Q63ZY6 315 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 ANKRD54Q6NXT1 300 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 WDR88Q6ZMY6 472 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 ZNF441Q8N8Z8 693 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 KCNH5Q8NCM2 988 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 LNX1Q8TBB1 728 aaPredicted RBP4.97□□□□□ -1.61
VRK1-203ENST00000555067 TBC1D16Q8TBP0 767 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 ATL1Q8WXF7 558 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 SGF29Q96ES7 293 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 PGLYRP2Q96PD5 576 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 NAP1L3Q99457 506 aaPredicted RBP4.97□□□□□ -1.61
VRK1-203ENST00000555067 ZNF577Q9BSK1 485 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 LSG1Q9H089 658 aaKnown RBP4.97□□□□□ -1.61
VRK1-203ENST00000555067 WNT5BQ9H1J7 359 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 RAD21L1Q9H4I0 556 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 TBC1D17Q9HA65 648 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 PALMDQ9NP74 551 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 FAM212BQ9NTI7 297 aaPredicted RBP4.97□□□□□ -1.61
VRK1-203ENST00000555067 ANKMY1Q9P2S6 941 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 TRIM10Q9UDY6 481 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 MAD2L2Q9UI95 211 aa4.97□□□□□ -1.61
VRK1-203ENST00000555067 ASTN2O75129 1339 aaPredicted RBP4.97□□□□□ -1.61
VRK1-203ENST00000555067 ANKUB1A6NFN9 424 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 CCDC169A6NNP5 214 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms