RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 SEMA3GQ9NS98 782 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 IL1RAPL1Q9NZN1 696 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 GALPQ9UBC7 116 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 ZC3H7BQ9UGR2 993 aaKnown RBP11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 GNPTGQ9UJJ9 305 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 ANAPC5Q9UJX4 755 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 IGLV3-12A0A075B6K2 115 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 A0A0J9YVX5 310 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 TCRBV7S3A2A0A539 114 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 NDUFS3O75489 264 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 ZGLP1P0C6A0 271 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 ERGP11308 486 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 TSFMP43897 325 aaKnown RBP11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 NPY2RP49146 381 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 KLC1Q07866 573 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 TMED2Q15363 201 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 TUBB8Q3ZCM7 444 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 RNF44Q7L0R7 432 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 OTOAQ7RTW8 1153 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 LRRC6Q86X45 466 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 SPNS2Q8IVW8 549 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 TXLNBQ8N3L3 684 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 MPP5Q8N3R9 675 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 ARHGEF39Q8N4T4 335 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 CCDC89Q8N998 374 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 TTC29Q8NA56 475 aaPredicted RBP11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 CATSPER1Q8NEC5 780 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 STT3BQ8TCJ2 826 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 GRHL3Q8TE85 626 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 LPGAT1Q92604 370 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 THOC3Q96J01 351 aaKnown RBP11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 C10orf90Q96M02 699 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 C5orf34Q96MH7 638 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 LMF1Q96S06 567 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 RAB11FIP5Q9BXF6 653 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 IL22Q9GZX6 179 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 ZNF304Q9HCX3 659 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 NXT1Q9UKK6 140 aaKnown RBP11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 GUCA1BQ9UMX6 200 aa11.66□□□□□ -0.54
MTHFD1-207ENST00000554677 APCP25054 2843 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 ABCA12Q86UK0 2595 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 IGKV1-8A0A0C4DH67 115 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 GOLGA8KD6RF30 607 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 H0YGG7 62 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 GOLGA8TH3BQL2 631 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 KPNA5O15131 536 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 NIPSNAP2O75323 286 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 VAPBO95292 243 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 MGAT1P26572 445 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 FMO4P31512 558 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 CCNFP41002 786 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 KCNJ1P48048 391 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 EIF3BP55884 814 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 ARF3P61204 181 aaPredicted RBP11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 ZNF169Q14929 603 aaPredicted RBP11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 RBBP7Q16576 425 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 TYSND1Q2T9J0 566 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 VWA2Q5GFL6 755 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 TTC23LQ6PF05 361 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 CNSTQ6PJW8 725 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 AMER2Q8N7J2 671 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 SPC24Q8NBT2 197 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 FAR1Q8WVX9 515 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 PSMF1Q92530 271 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 C8orf44Q96CB5 159 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 DPH7Q9BTV6 452 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 SYBUQ9NX95 663 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 BFARQ9NZS9 450 aa11.65□□□□□ -0.54
MTHFD1-207ENST00000554677 ARHGEF33A8MVX0 844 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 HPP00738 406 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 EIF2S1P05198 315 aaKnown RBP11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 ATP5DP30049 168 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 CARSP49589 748 aaKnown RBP11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 EFNA3P52797 238 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 ADARP55265 1226 aaKnown RBP11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 SNRPNP63162 240 aaKnown RBP11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 MFAP5Q13361 173 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 ELOAQ14241 798 aaKnown RBP11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 RPS6KA1Q15418 735 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 ACSBG2Q5FVE4 666 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 B3GNTL1Q67FW5 361 aaPredicted RBP11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 ZNF324BQ6AW86 544 aaPredicted RBP11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 PRMT9Q6P2P2 845 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 LRRC8BQ6P9F7 803 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 SUSD1Q6UWL2 747 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 ISLR2Q6UXK2 745 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 CENPUQ71F23 418 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 PAQR7Q86WK9 346 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 PRSS58Q8IYP2 241 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 OR9A1PQ8NGU1 263 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 COG1Q8WTW3 980 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 SKA2Q8WVK7 121 aaPredicted RBP11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 FAM136AQ96C01 138 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 MIEF2Q96C03 454 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 SLC30A3Q99726 388 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 ZFYVE21Q9BQ24 234 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 PLCD4Q9BRC7 762 aa11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 TRIM56Q9BRZ2 755 aaKnown RBP11.64□□□□□ -0.55
MTHFD1-207ENST00000554677 CRB3Q9BUF7 120 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms