RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 RALGPS2Q86X27 583 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-212ENST00000554467 SLC32A1Q9H598 525 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 RDH14Q9HBH5 336 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 PRSS16Q9NQE7 514 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 BCAP29Q9UHQ4 241 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 CCL27Q9Y4X3 112 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 PLXNA2O75051 1894 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 EIF3FO00303 357 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-212ENST00000554467 MATN4O95460 622 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 FTH1P02794 183 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 SLC6A2P23975 617 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 P2RY2P41231 377 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 BMXP51813 675 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 TXNL4AP83876 142 aaKnown RBP11.35□□□□□ -0.59
SHMT2-212ENST00000554467 NAE1Q13564 534 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 NIPAL1Q6NVV3 410 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 LIX1Q8N485 282 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 MCOLN3Q8TDD5 553 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 BORCS5Q969J3 196 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 ITPKCQ96DU7 683 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 COQ10AQ96MF6 247 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 NAA50Q9GZZ1 169 aaKnown RBP11.35□□□□□ -0.59
SHMT2-212ENST00000554467 GDE1Q9NZC3 331 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 SERGEFQ9UGK8 458 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 CDH7Q9ULB5 785 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 AP4S1Q9Y587 144 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 A0A1W2PP18 115 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 SCAMP1O15126 338 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 ATG13O75143 517 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 LRATO95237 230 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 MTHFD1P11586 935 aaKnown RBP11.35□□□□□ -0.59
SHMT2-212ENST00000554467 CYP2A7P20853 494 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 ATP6V1B2P21281 511 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 GBX1Q14549 363 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 PDGFRLQ15198 375 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 PLEKHS1Q5SXH7 462 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 SELENOMQ8WWX9 145 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 ASB9Q96DX5 294 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 LRIG1Q96JA1 1093 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 ARPC5LQ9BPX5 153 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 ACPTQ9BZG2 426 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 RPF2Q9H7B2 306 aaKnown RBP11.35□□□□□ -0.59
SHMT2-212ENST00000554467 COQ10BQ9H8M1 238 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 SIAEQ9HAT2 523 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 CD300AQ9UGN4 299 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 A0A1W2PPW3 197 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 GFYI3L273 518 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 AREL1O15033 823 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 MID1O15344 667 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 SLC16A8O95907 504 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 C8GP07360 202 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 MAP4P27816 1152 aaKnown RBP11.34□□□□□ -0.59
SHMT2-212ENST00000554467 TCEA2Q15560 299 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 C8orf82Q6P1X6 216 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-212ENST00000554467 SUSD1Q6UWL2 747 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-212ENST00000554467 SPPL2CQ8IUH8 684 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 KIAA2013Q8IYS2 634 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 BRINP2Q9C0B6 783 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 ELOVL6Q9H5J4 265 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 TM7SF3Q9NS93 570 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 MSRAQ9UJ68 235 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 DLGAP4Q9Y2H0 992 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 WDR87Q6ZQQ6 2873 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 IGLON5A6NGN9 336 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 H3BMQ9 156 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 PCDH8O95206 1070 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 PCCBP05166 539 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 TIE1P35590 1138 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 MTPNP58546 118 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 PFN3P60673 137 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 BNIP3Q12983 259 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 CHIT1Q13231 466 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 SELPLGQ14242 412 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 C2orf27AQ580R0 203 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 SAMD4BQ5PRF9 694 aaKnown RBP11.34□□□□□ -0.59
SHMT2-212ENST00000554467 LDLRAP1Q5SW96 308 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 ERN2Q76MJ5 926 aaKnown RBP11.34□□□□□ -0.59
SHMT2-212ENST00000554467 COG8Q96MW5 612 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 MTERF1Q99551 399 aaKnown RBP11.34□□□□□ -0.59
SHMT2-212ENST00000554467 SLC29A1Q99808 456 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 HAUS8Q9BT25 410 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 CFAP20Q9Y6A4 193 aaKnown RBP11.34□□□□□ -0.59
SHMT2-212ENST00000554467 TRIOBPQ9H2D6 2365 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 E7EQ34 232 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 AXIN1O15169 862 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 AQP9O43315 295 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 EBLN1P0CF75 366 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 EMX2Q04743 252 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 NFE2L1Q14494 772 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 FAM174BQ3ZCQ3 159 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 TRMT11Q7Z4G4 463 aaKnown RBP11.34□□□□□ -0.59
SHMT2-212ENST00000554467 TMEM126BQ8IUX1 230 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 CPA6Q8N4T0 437 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 SLC15A4Q8N697 577 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 CDC26Q8NHZ8 85 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 UBTD2Q8WUN7 234 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 TSSK3Q96PN8 268 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 CCM2Q9BSQ5 444 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 NTMT1Q9BV86 223 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms