RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 KLHL36Q8N4N3 616 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 PAPD5Q8NDF8 572 aaKnown RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 SPPL2BQ8TCT7 592 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 HASPINQ8TF76 798 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 TRUB1Q8WWH5 349 aaKnown RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 S100ZQ8WXG8 99 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 LPGAT1Q92604 370 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 ISOC1Q96CN7 298 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 TMA16Q96EY4 203 aaKnown RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 PIWIL1Q96J94 861 aaKnown RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 LOXL4Q96JB6 756 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 KLHL32Q96NJ5 620 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 TBL1YQ9BQ87 522 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 BDH2Q9BUT1 245 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 ADI1Q9BV57 179 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 NUSAP1Q9BXS6 441 aaKnown RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 SHCBP1LQ9BZQ2 653 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 OR10A5Q9H207 317 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 CATSPERBQ9H7T0 1116 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 ZMAT4Q9H898 229 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 CAAP1Q9H8G2 361 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 COQ10BQ9H8M1 238 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 ANKHQ9HCJ1 492 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 ZNF334Q9HCZ1 680 aaPredicted RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 AGPAT4Q9NRZ5 378 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 OLAHQ9NV23 265 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 SMPD3Q9NY59 655 aaPredicted RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 GTSE1Q9NYZ3 720 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 SEPT10Q9P0V9 454 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 MTRRQ9UBK8 725 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 ZDHHC2Q9UIJ5 367 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 RALYQ9UKM9 306 aaKnown RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 RIMKLBQ9ULI2 386 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 SNX13Q9Y5W8 968 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 FRYLO94915 3013 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 ANKRD36A6QL64 1941 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 USP24Q9UPU5 2620 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 RNF103-CHMP3A0A140T963 221 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 TMEM8BA6NDV4 472 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 E7ENX8 843 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 H3BSA7 217 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 TMEM189-UBE2V1I3L0A0 370 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 K7ESF4 209 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 UBXN8O00124 270 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 KPNA4O00629 521 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-203ENST00000554264 GABRDO14764 452 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 AREL1O15033 823 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 ADAM12O43184 909 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 SLC7A4O43246 635 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 ZMPSTE24O75844 475 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CPNE6O95741 557 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 TOP3BO95985 862 aaKnown RBP5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CHEK2O96017 543 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 PRLP01236 227 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CHRNGP07510 517 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 ZNF806P0C7X5 589 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CHRNB1P11230 501 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CEBPBP17676 345 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 FCARP24071 287 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 LRPAP1P30533 357 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 GDI1P31150 447 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 HOXA6P31267 233 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 LEPRP48357 1165 aaKnown RBP5.79□□□□□ -1.48
VPS33B-203ENST00000554264 LHX1P48742 406 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 HLCSP50747 726 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 PKNOX1P55347 436 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 C21orf59P57076 290 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CRADDP78560 199 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CDKL1Q00532 357 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 IL18R1Q13478 541 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 SOWAHAQ2M3V2 549 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 RGS21Q2M5E4 152 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 RFX4Q33E94 735 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 AGKQ53H12 422 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 DCAF6Q58WW2 860 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 XKR4Q5GH76 650 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 TECRLQ5HYJ1 363 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 FAM78AQ5JUQ0 283 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 DGKKQ5KSL6 1271 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 BROXQ5VW32 411 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 GRAMD4Q6IC98 578 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 ZNF773Q6PK81 442 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 UNQ6494/PRO21346Q6UXR6 183 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 ALKAL1Q6UXT8 129 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 LARP4Q71RC2 724 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CXXC5Q7LFL8 322 aaKnown RBP5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CUZD1Q86UP6 607 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 PIGZQ86VD9 579 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 WDR5BQ86VZ2 330 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 FAM131BQ86XD5 332 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CLVS1Q8IUQ0 354 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CENPLQ8N0S6 344 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-203ENST00000554264 LSMEM2Q8N112 164 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 ELMOD1Q8N336 334 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 SFRP1Q8N474 314 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 DHRSXQ8N5I4 330 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CCNYL1Q8N7R7 359 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 SNX31Q8N9S9 440 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 FAM47BQ8NA70 645 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 B3GALNT2Q8NCR0 500 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms