RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 MYLPFQ96A32 169 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 CCDC115Q96NT0 180 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 COPS4Q9BT78 406 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 APOL5Q9BWW9 433 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 MRPL4Q9BYD3 311 aaKnown RBP9.31□□□□□ -0.92
SIX4-202ENST00000554079 MIXL1Q9H2W2 232 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 RHOJQ9H4E5 214 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 ACTR8Q9H981 624 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 BABAM2Q9NXR7 383 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 ADAM30Q9UKF2 790 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 ING4Q9UNL4 249 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 CMAHPQ9Y471 501 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 SESN1Q9Y6P5 492 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 TRABD2BA6NFA1 517 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 FAM74A7A6NL05 159 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 MPTX1A8MV57 137 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 AGRPO00253 132 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 QSOX1O00391 747 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 GNGT2O14610 69 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 PCDHGA12O60330 932 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 MICAL2O94851 1124 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 ITGB1P05556 798 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 JUPP14923 745 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 SAT1P21673 171 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 MRPL19P49406 292 aaKnown RBP9.3□□□□□ -0.92
SIX4-202ENST00000554079 CLCN5P51795 746 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 KPNA2P52292 529 aaKnown RBP9.3□□□□□ -0.92
SIX4-202ENST00000554079 AIF1P55008 147 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 YWHAEP62258 255 aaKnown RBP9.3□□□□□ -0.92
SIX4-202ENST00000554079 ABATP80404 500 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 ELP6Q0PNE2 266 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 OLIG2Q13516 323 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 TP53BP2Q13625 1128 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 WSCD2Q2TBF2 565 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 LGALSLQ3ZCW2 172 aaPredicted RBP9.3□□□□□ -0.92
SIX4-202ENST00000554079 FAM74A3Q4VXF1 159 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 RUNDC3AQ59EK9 446 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 TECRLQ5HYJ1 363 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 SLC27A4Q6P1M0 643 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 KLHL17Q6TDP4 642 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 UNC5DQ6UXZ4 953 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 MACC1Q6ZN28 852 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 ATCAYQ86WG3 371 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 CEP97Q8IW35 865 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 MFSD6LQ8IWD5 586 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 ADHFE1Q8IWW8 467 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 PGBD5Q8N414 524 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 SPATA6LQ8N4H0 392 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 CERS5Q8N5B7 392 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 OR6S1Q8NH40 331 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 FBXO30Q8TB52 745 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 GPR152Q8TDT2 470 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 RXFP2Q8WXD0 754 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 UBE2FQ969M7 185 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 PITX2Q99697 317 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 ZNF670Q9BS34 389 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 SORBS1Q9BX66 1292 aaKnown RBP9.3□□□□□ -0.92
SIX4-202ENST00000554079 CD244Q9BZW8 370 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 CLEC4MQ9H2X3 399 aaPredicted RBP9.3□□□□□ -0.92
SIX4-202ENST00000554079 EMC7Q9NPA0 242 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 PRDM9Q9NQV7 894 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 ABCC13Q9NSE7 274 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 RBFOX1Q9NWB1 397 aaKnown RBP9.3□□□□□ -0.92
SIX4-202ENST00000554079 COPZ2Q9P299 210 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 PSORS1C1Q9UIG5 152 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 SPATA2Q9UM82 520 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 EDARQ9UNE0 448 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 PLCL2Q9UPR0 1127 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 GPR45Q9Y5Y3 372 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 PTGDR2Q9Y5Y4 395 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 SLC22A7Q9Y694 548 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 CLCA3PQ9Y6N3 262 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 RNF215Q9Y6U7 377 aa9.3□□□□□ -0.92
SIX4-202ENST00000554079 EFCAB10A6NFE3 127 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 CBX7O95931 251 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 PTHP01270 115 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 HBQ1P09105 142 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 HLA-EP13747 358 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 PSMB4P28070 264 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 HOXA9P31269 272 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 GDI2P50395 445 aaKnown RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 DAPP51397 102 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 RPP38P78345 283 aaKnown RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 MXD4Q14582 209 aaPredicted RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 FCN2Q15485 313 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 LCN1P1Q5VSP4 162 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 FAM131AQ6UXB0 335 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 DEFB132Q7Z7B7 95 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 C12orf40Q86WS4 652 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 NANPQ8TBE9 248 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 GANCQ8TET4 914 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 BSNDQ8WZ55 320 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 NSMAFQ92636 917 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 KIAA1143Q96AT1 154 aaPredicted RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 ARL5BQ96KC2 179 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 TEX37Q96LM6 180 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 BARD1Q99728 777 aaKnown RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 TEKT3Q9BXF9 490 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 AMNQ9BXJ7 453 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 GORASP2Q9H8Y8 452 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms