RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 TXNDC11Q6PKC3 985 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 Q6ZNB5 142 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 GPRIN3Q6ZVF9 776 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 CLDN19Q8N6F1 224 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 OR56A4Q8NGH8 313 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 MCOLN3Q8TDD5 553 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 VOPP1Q96AW1 172 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 ZHX1-C8orf76Q96EF9 292 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 TMEM74Q96NL1 305 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 CFHR5Q9BXR6 569 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 NUSAP1Q9BXS6 441 aaKnown RBP11.93□□□□□ -0.5
SHMT2-207ENST00000553837 UGT2B28Q9BY64 529 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 GPR63Q9BZJ6 419 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 IL21Q9HBE4 155 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 ELOVL2Q9NXB9 296 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 STMN3Q9NZ72 180 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 EVLQ9UI08 416 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-207ENST00000553837 VPS9D1Q9Y2B5 631 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 DHRS7Q9Y394 339 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 TPRKBQ9Y3C4 175 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 PABPN1LA6NDY0 278 aaKnown RBP11.92□□□□□ -0.5
SHMT2-207ENST00000553837 A8MX80 341 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 OR7A17O14581 309 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 SNX2O60749 519 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 MLYCDO95822 493 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 ANXA6P08133 673 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 PCNAP12004 261 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 SPNP16150 400 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 HMGCLP35914 325 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 PIGAP37287 484 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 OR4D2P58180 307 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 NCS1P62166 190 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 PPP2R2BQ00005 443 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 CACNG1Q06432 222 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 CDK5R2Q13319 367 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 CDKN3Q16667 212 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 DEFB115Q30KQ5 88 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 PLEKHG6Q3KR16 790 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 CEP78Q5JTW2 689 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 C6orf136Q5SQH8 315 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 AGAP6Q5VW22 663 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 ZNF544Q6NX49 715 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 ZNF783Q6ZMS7 281 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 RBM23Q86U06 439 aaKnown RBP11.92□□□□□ -0.5
SHMT2-207ENST00000553837 SERPINA9Q86WD7 417 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 ZSWIM9Q86XI8 627 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 TMEM199Q8N511 208 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 MYO19Q96H55 970 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 AGAP4Q96P64 663 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 ZNF382Q96SR6 550 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 BRINP2Q9C0B6 783 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 CLPBQ9H078 707 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 C3orf18Q9UK00 162 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 AGAP5A6NIR3 686 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 GNGT2O14610 69 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 PRMT5O14744 637 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-207ENST00000553837 NOBOXO60393 691 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 ZNF821O75541 412 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-207ENST00000553837 MFN2O95140 757 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 APOA1P02647 267 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 FOSL1P15407 271 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 PKLRP30613 574 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 CASP2P42575 452 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 MRPL19P49406 292 aaKnown RBP11.92□□□□□ -0.5
SHMT2-207ENST00000553837 DEFA1P59665 94 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 DEFA3P59666 94 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 ZNF45Q02386 682 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 NPTX1Q15818 432 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 ZNF404Q494X3 552 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 NDUFAF5Q5TEU4 345 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 TPGS2Q68CL5 300 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 PNCKQ6P2M8 343 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 CCBE1Q6UXH8 406 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-207ENST00000553837 IDO2Q6ZQW0 420 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 HID1Q8IV36 788 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 AADATQ8N5Z0 425 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 KIAA1958Q8N8K9 716 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 SIMC1Q8NDZ2 872 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 LILRB1Q8NHL6 650 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-207ENST00000553837 PROKR1Q8TCW9 393 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 COQ7Q99807 217 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 CIPCQ9C0C6 399 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 PIF1Q9H611 641 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 KAT8Q9H7Z6 458 aaKnown RBP11.92□□□□□ -0.5
SHMT2-207ENST00000553837 LTB4R2Q9NPC1 389 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 INTS7Q9NVH2 962 aaKnown RBP11.92□□□□□ -0.5
SHMT2-207ENST00000553837 ERVK-18Q9QC07 812 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 PKP3Q9Y446 797 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 SPEF1Q9Y4P9 236 aa11.92□□□□□ -0.5
SHMT2-207ENST00000553837 OBSL1O75147 1896 aa11.91□□□□□ -0.5
SHMT2-207ENST00000553837 SCN8AQ9UQD0 1980 aa11.91□□□□□ -0.5
SHMT2-207ENST00000553837 SNTNA6NMZ2 147 aa11.91□□□□□ -0.5
SHMT2-207ENST00000553837 PDZK1P1A8MUH7 402 aa11.91□□□□□ -0.5
SHMT2-207ENST00000553837 PRRG1O14668 218 aa11.91□□□□□ -0.5
SHMT2-207ENST00000553837 SLC16A6O15403 523 aa11.91□□□□□ -0.5
SHMT2-207ENST00000553837 TAPBPO15533 448 aa11.91□□□□□ -0.5
SHMT2-207ENST00000553837 SLC22A3O75751 556 aa11.91□□□□□ -0.5
SHMT2-207ENST00000553837 PRKD3O94806 890 aa11.91□□□□□ -0.5
SHMT2-207ENST00000553837 CLDN7O95471 211 aa11.91□□□□□ -0.5
SHMT2-207ENST00000553837 PRAMEF1O95521 474 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms