RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 SGPP1Q9BX95 441 aa9.43□□□□□ -0.9
CHD8-204ENST00000553622 C1QTNF3Q9BXJ4 246 aa9.43□□□□□ -0.9
CHD8-204ENST00000553622 C20orf27Q9GZN8 174 aa9.43□□□□□ -0.9
CHD8-204ENST00000553622 ILKAPQ9H0C8 392 aaPredicted RBP9.43□□□□□ -0.9
CHD8-204ENST00000553622 KLHL25Q9H0H3 589 aa9.43□□□□□ -0.9
CHD8-204ENST00000553622 UCK1Q9HA47 277 aa9.43□□□□□ -0.9
CHD8-204ENST00000553622 ZBTB26Q9HCK0 441 aa9.43□□□□□ -0.9
CHD8-204ENST00000553622 MRPS30Q9NP92 439 aaKnown RBP9.43□□□□□ -0.9
CHD8-204ENST00000553622 FGFR1OP2Q9NVK5 253 aa9.43□□□□□ -0.9
CHD8-204ENST00000553622 FTSJ1Q9UET6 329 aa9.43□□□□□ -0.9
CHD8-204ENST00000553622 STK38LQ9Y2H1 464 aa9.43□□□□□ -0.9
CHD8-204ENST00000553622 PCDHGB2Q9Y5G2 931 aa9.43□□□□□ -0.9
CHD8-204ENST00000553622 PCNX2A6NKB5 2137 aa9.43□□□□□ -0.9
CHD8-204ENST00000553622 SCN2AQ99250 2005 aa9.43□□□□□ -0.9
CHD8-204ENST00000553622 A0A1W2PPV9 198 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 FAM221BA6H8Z2 402 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 OR5K3A6NET4 321 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 UBFD1O14562 309 aaKnown RBP9.42□□□□□ -0.9
CHD8-204ENST00000553622 CDX4O14627 284 aaPredicted RBP9.42□□□□□ -0.9
CHD8-204ENST00000553622 FFAR3O14843 346 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 KLF11O14901 512 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 GPR42O15529 346 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 ZW10O43264 779 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 DUX1O43812 170 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 SNNO75324 88 aaPredicted RBP9.42□□□□□ -0.9
CHD8-204ENST00000553622 OR4F21O95013 312 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 CLDN9O95484 217 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 SPTBP11277 2137 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 UGT2B7P16662 529 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 NPPBP16860 134 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 GNAZP19086 355 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 VARSP26640 1264 aaKnown RBP9.42□□□□□ -0.9
CHD8-204ENST00000553622 PRDX3P30048 256 aaKnown RBP9.42□□□□□ -0.9
CHD8-204ENST00000553622 PEBP1P30086 187 aaKnown RBP9.42□□□□□ -0.9
CHD8-204ENST00000553622 HMOX2P30519 316 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 ARRB2P32121 409 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 DUSP3P51452 185 aaPredicted RBP9.42□□□□□ -0.9
CHD8-204ENST00000553622 SEC24CP53992 1094 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 PKNOX1P55347 436 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 PPP1CAP62136 330 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 YBX1P67809 324 aaKnown RBP9.42□□□□□ -0.9
CHD8-204ENST00000553622 SH3BP2P78314 561 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 CBX1P83916 185 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 MEF2AQ02078 507 aaPredicted RBP9.42□□□□□ -0.9
CHD8-204ENST00000553622 KIR2DS3Q14952 304 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 KIF26BQ2KJY2 2108 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 SGO1Q5FBB7 561 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 PERM1Q5SV97 790 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 CATSPEREQ5SY80 951 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 FAM219BQ5XKK7 198 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 ICE2Q659A1 982 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 CLEC6AQ6EIG7 209 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 LCTLQ6UWM7 567 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 RGS9BPQ6ZS82 235 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 FAM92BQ6ZTR7 304 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 USP53Q70EK8 1073 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 NAXDQ8IW45 347 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 KLHDC8AQ8IYD2 350 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 LRRC34Q8IZ02 419 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 LSMEM2Q8N112 164 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 AFAP1L2Q8N4X5 818 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 ZNF781Q8N8C0 355 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 CDYL2Q8N8U2 506 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 FAM181AQ8N9Y4 354 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 OR4F6Q8NGB9 312 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 OR6C4Q8NGE1 309 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 HMGCLL1Q8TB92 370 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 IFI44Q8TCB0 444 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 AGAP11Q8TF27 550 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 NAT6Q93015 286 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 SLC22A18Q96BI1 424 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 CHMP6Q96FZ7 201 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 TGM7Q96PF1 710 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 KCNA7Q96RP8 456 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 ZNF382Q96SR6 550 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 PHOX2BQ99453 314 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 SORT1Q99523 831 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 NSRP1Q9H0G5 558 aaKnown RBP9.42□□□□□ -0.9
CHD8-204ENST00000553622 CCDC134Q9H6E4 229 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 PNPOQ9NVS9 261 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 CUEDC1Q9NWM3 386 aaPredicted RBP9.42□□□□□ -0.9
CHD8-204ENST00000553622 GPRC5BQ9NZH0 403 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 KLHL3Q9UH77 587 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 KLHL20Q9Y2M5 609 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 RNF11Q9Y3C5 154 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 CROCCQ5TZA2 2017 aa9.42□□□□□ -0.9
CHD8-204ENST00000553622 USP34Q70CQ2 3546 aa9.41□□□□□ -0.9
CHD8-204ENST00000553622 LY6G6EA0A0G2JKS1 128 aa9.41□□□□□ -0.9
CHD8-204ENST00000553622 A0A1B0GTL3 188 aa9.41□□□□□ -0.9
CHD8-204ENST00000553622 GMNCA6NCL1 334 aa9.41□□□□□ -0.9
CHD8-204ENST00000553622 TMEM233B4DJY2 109 aa9.41□□□□□ -0.9
CHD8-204ENST00000553622 H7BY64 318 aa9.41□□□□□ -0.9
CHD8-204ENST00000553622 SH3BP5O60239 455 aa9.41□□□□□ -0.9
CHD8-204ENST00000553622 GDF9O60383 454 aa9.41□□□□□ -0.9
CHD8-204ENST00000553622 SKAP2O75563 359 aaPredicted RBP9.41□□□□□ -0.9
CHD8-204ENST00000553622 RASSF9O75901 435 aa9.41□□□□□ -0.9
CHD8-204ENST00000553622 CHEK2O96017 543 aa9.41□□□□□ -0.9
CHD8-204ENST00000553622 CAPN1P07384 714 aa9.41□□□□□ -0.9
CHD8-204ENST00000553622 PCNAP12004 261 aa9.41□□□□□ -0.9
CHD8-204ENST00000553622 CKMT1AP12532 417 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms