RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 H3BMM5 538 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 P2RX6O15547 441 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 KDM1AO60341 852 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 RECKO95980 971 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 IMPA1P29218 277 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 ITGA8P53708 1063 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 PNLIPRP1P54315 467 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 DR1Q01658 176 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 ZXDCQ2QGD7 858 aaPredicted RBP17.43■□□□□ 0.38
SHMT2-206ENST00000553529 HKDC1Q2TB90 917 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 TLDC1Q6P9B6 456 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 RNF44Q7L0R7 432 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 EEF1AKMT1Q8WVE0 214 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 KCNJ9Q92806 393 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 SLCO2A1Q92959 643 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 NAPGQ99747 312 aaPredicted RBP17.43■□□□□ 0.38
SHMT2-206ENST00000553529 OLFM1Q99784 485 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 MACROD1Q9BQ69 325 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 RAB11FIP5Q9BXF6 653 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 CLMPQ9H6B4 373 aa17.43■□□□□ 0.38
SHMT2-206ENST00000553529 ZC3H7BQ9UGR2 993 aaKnown RBP17.43■□□□□ 0.38
SHMT2-206ENST00000553529 MRPS2Q9Y399 296 aaKnown RBP17.43■□□□□ 0.38
SHMT2-206ENST00000553529 A0A1B0GX78 115 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 OR2A25A4D2G3 310 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 E7ENX8 843 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 AHSGP02765 367 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 CCNFP41002 786 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 FOLR3P41439 243 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 TAP2Q03519 686 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 KCNC4Q03721 635 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 PHKG1Q16816 387 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 HIBCHQ6NVY1 386 aaPredicted RBP17.42■□□□□ 0.38
SHMT2-206ENST00000553529 PAQR3Q6TCH7 311 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 PROKR1Q8TCW9 393 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 ASB11Q8WXH4 323 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 SLC22A18Q96BI1 424 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 KRT12Q99456 494 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 SPSB2Q99619 263 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 ZBTB20Q9HC78 741 aaPredicted RBP17.42■□□□□ 0.38
SHMT2-206ENST00000553529 MLXIPLQ9NP71 852 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 GPN3Q9UHW5 284 aaPredicted RBP17.42■□□□□ 0.38
SHMT2-206ENST00000553529 PSAT1Q9Y617 370 aa17.42■□□□□ 0.38
SHMT2-206ENST00000553529 NUP210LQ5VU65 1888 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 H0YGG7 62 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 SMAPO00193 183 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 HAT1O14929 419 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 DSCR3O14972 297 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 HBQ1P09105 142 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 RPA3P35244 121 aaPredicted RBP17.41■□□□□ 0.38
SHMT2-206ENST00000553529 RPL21P46778 160 aaKnown RBP17.41■□□□□ 0.38
SHMT2-206ENST00000553529 UQCRFS1P47985 274 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 EFNA3P52797 238 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 ARF3P61204 181 aaPredicted RBP17.41■□□□□ 0.38
SHMT2-206ENST00000553529 KLRB1Q12918 225 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 NKG7Q16617 165 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 ICE2Q659A1 982 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 CAPN12Q6ZSI9 719 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 UBE2R2Q712K3 238 aaPredicted RBP17.41■□□□□ 0.38
SHMT2-206ENST00000553529 PAQR7Q86WK9 346 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 OR2Y1Q8NGV0 311 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 INPP5DQ92835 1189 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 CERS2Q96G23 380 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 FAM167BQ9BTA0 163 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 CCDC68Q9H2F9 335 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 MRPS30Q9NP92 439 aaKnown RBP17.41■□□□□ 0.38
SHMT2-206ENST00000553529 SRPK3Q9UPE1 567 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 SNX24Q9Y343 169 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 SAR1BQ9Y6B6 198 aa17.41■□□□□ 0.38
SHMT2-206ENST00000553529 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.41■□□□□ 0.388e-7■■□□□ 12.4
SHMT2-206ENST00000553529 SEC16AO15027 2179 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 HYKKA2RU49 373 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 GFYI3L273 518 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 PFDN6O15212 129 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 CEACAM4O75871 244 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 CATP04040 527 aaKnown RBP17.4■□□□□ 0.38
SHMT2-206ENST00000553529 MPC1LP0DKB6 136 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 CSRP3P50461 194 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 PGDP52209 483 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 FOXK1P85037 733 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 SRSF1Q07955 248 aaKnown RBP eCLIP17.4■□□□□ 0.38
SHMT2-206ENST00000553529 C2orf54Q08AI8 447 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 ZNF460Q14592 562 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 SYT16Q17RD7 645 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 SPANXN3Q5MJ09 141 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 TEDDM1Q5T9Z0 273 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 ZNF425Q6IV72 752 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 TMEM207Q6UWW9 146 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 TEX19Q8NA77 164 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 SMPDL3AQ92484 453 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 ALKBH8Q96BT7 664 aaKnown RBP17.4■□□□□ 0.38
SHMT2-206ENST00000553529 DPH2Q9BQC3 489 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-206ENST00000553529 PLCD4Q9BRC7 762 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 ATG10Q9H0Y0 220 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 PPANQ9NQ55 473 aaKnown RBP17.4■□□□□ 0.38
SHMT2-206ENST00000553529 INTS7Q9NVH2 962 aaKnown RBP17.4■□□□□ 0.38
SHMT2-206ENST00000553529 P4HTMQ9NXG6 502 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 ANAPC2Q9UJX6 822 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 PDE10AQ9Y233 779 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 RUVBL1Q9Y265 456 aaKnown RBP17.4■□□□□ 0.38
SHMT2-206ENST00000553529 CSAG2Q9Y5P2 127 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms