RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 TSPY1Q01534 308 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 RHAGQ02094 409 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 CFHR1Q03591 330 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ZFP36L1Q07352 338 aaKnown RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ILKQ13418 452 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 MAMLD1Q13495 774 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 FHL2Q14192 279 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 FZD2Q14332 565 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 GALNT3Q14435 633 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 SEMA3AQ14563 771 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 TBCEQ15813 527 aaPredicted RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF284Q2VY69 593 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 EDRF1Q3B7T1 1238 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 PIP5KL1Q5T9C9 394 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 TRNP1Q6NT89 227 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 PMF1Q6P1K2 205 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 NCEH1Q6PIU2 408 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF474Q6S9Z5 364 aaPredicted RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 KLHL24Q6TFL4 600 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF813Q6ZN06 617 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 GCNT7Q6ZNI0 430 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 RBM44Q6ZP01 1051 aaKnown RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 Q6ZPA2 131 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 TPGS1Q6ZTW0 290 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 B4GALNT4Q76KP1 1039 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 RNF144BQ7Z419 303 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 TRMT11Q7Z4G4 463 aaKnown RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 TFAP2DQ7Z6R9 452 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ABI3BPQ7Z7G0 1075 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ACOT1Q86TX2 421 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 PIGZQ86VD9 579 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 IGFN1Q86VF2 1251 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 C17orf82Q86X59 251 aaPredicted RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 METTL23Q86XA0 190 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 APCDD1Q8J025 514 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 AMER2Q8N7J2 671 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 SCAIQ8N9R8 606 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ANKRD52Q8NB46 1076 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 C11orf65Q8NCR3 313 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 FIBINQ8TAL6 211 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 OSR1Q8TAX0 266 aaPredicted RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 METTL6Q8TCB7 284 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 TAS1R2Q8TE23 839 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ZFPM2Q8WW38 1151 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 FBXO32Q969P5 355 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 NT5C3BQ969T7 300 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ERLEC1Q96DZ1 483 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 SIPA1Q96FS4 1042 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 EEF2KMTQ96G04 330 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 SMARCD1Q96GM5 515 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 RITA1Q96K30 269 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 TEFMQ96QE5 360 aaKnown RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ACCSQ96QU6 501 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 PSMB7Q99436 277 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 FUCA2Q9BTY2 467 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 EFHD1Q9BUP0 239 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 GATA5Q9BWX5 397 aaPredicted RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 BBS2Q9BXC9 721 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 DUSP16Q9BY84 665 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 DMAP1Q9NPF5 467 aaPredicted RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 SEMA4BQ9NPR2 832 aaPredicted RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 EIF2B3Q9NR50 452 aaKnown RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 MPP6Q9NZW5 540 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 WDR35Q9P2L0 1181 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 PEMTQ9UBM1 199 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ICKQ9UPZ9 632 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ICE1Q9Y2F5 2266 aa2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF469Q96JG9 3925 aaPredicted RBP2.36□□□□□ -2.03
CPSF6-207ENST00000551516 ITPR3Q14573 2671 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 NIPBLQ6KC79 2804 aaeCLIP2.35□□□□□ -2.03
CPSF6-207ENST00000551516 ADAMTS9Q9P2N4 1935 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 ABCA2Q9BZC7 2435 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 IGLV3-10A0A075B6K4 115 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 A0A1W2PQM1 296 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 ARHGAP10A1A4S6 786 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 EME2A4GXA9 379 aaPredicted RBP2.35□□□□□ -2.03
CPSF6-207ENST00000551516 PRSS47A8MTI9 375 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 TLR4O00206 839 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 AP3D1O14617 1153 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 PRRG2O14669 202 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 CLIC2O15247 247 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 MID1O15344 667 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 PLRG1O43660 514 aaKnown RBP2.35□□□□□ -2.03
CPSF6-207ENST00000551516 DFNA5O60443 496 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 PROP1O75360 226 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 GFPT2O94808 682 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 SEMA4FO95754 770 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 SERPINC1P01008 464 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 CALCAP01258 141 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 HLA-DRAP01903 254 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 RPN1P04843 607 aaKnown RBP2.35□□□□□ -2.03
CPSF6-207ENST00000551516 CLEC3BP05452 202 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 LCKP06239 509 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 GP1BAP07359 652 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 ACADMP11310 421 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 ALOX12P18054 663 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 TNFRSF1AP19438 455 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 SYT1P21579 422 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 NFKBIAP25963 317 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms