RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 OR2T7P0C7T2 308 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 SUPT20HL2P0C7V6 817 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 DANCRP0C864 163 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 STMN1P16949 149 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 ASCL1P50553 236 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 KRTAP10-2P60368 255 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 MORF4L2Q15014 288 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 ANKRD20A4Q4UJ75 823 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 TMEM35AQ53FP2 167 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 ANKRD20A8PQ5CZ79 823 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 CCDC158Q5M9N0 1113 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 ANKRD20A2Q5SQ80 823 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 ANKRD20A1Q5TYW2 823 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 ANKRD20A3Q5VUR7 823 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 LINC00696Q6ZRV3 163 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 MEPCEQ7L2J0 689 aaKnown RBP5.1□□□□□ -1.59
CPSF6-206ENST00000550987 ABI3BPQ7Z7G0 1075 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 TLK2Q86UE8 772 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 GGNQ86UU5 652 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 KRTAP19-1Q8IUB9 90 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 TIGD4Q8IY51 512 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 DOCK3Q8IZD9 2030 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 SYCP3Q8IZU3 236 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 ZNF611Q8N823 705 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 NHLRC2Q8NBF2 726 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 ATAD1Q8NBU5 361 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 SLC16A11Q8NCK7 471 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 THAP6Q8TBB0 222 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 SHROOM3Q8TF72 1996 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 CORO2AQ92828 525 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 ZG16BQ96DA0 208 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 OTUB1Q96FW1 271 aaPredicted RBP5.1□□□□□ -1.59
CPSF6-206ENST00000550987 C3orf30Q96M34 536 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 OR1F2PQ96R84 312 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 SLX1AQ9BQ83 275 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 INPP5KQ9BT40 448 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 UTP14AQ9BVJ6 771 aaKnown RBP5.1□□□□□ -1.59
CPSF6-206ENST00000550987 LRMDAQ9H2I8 198 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 FN3KQ9H479 309 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 MYOZ2Q9NPC6 264 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 ERAP1Q9NZ08 941 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 KNSTRNQ9Y448 316 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 LRBAP50851 2863 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 F8P00451 2351 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 RTL1A6NKG5 1358 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 C15orf62A8K5M9 175 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 TNFRSF13BO14836 293 aaPredicted RBP5.09□□□□□ -1.59
CPSF6-206ENST00000550987 SIX3O95343 332 aaPredicted RBP5.09□□□□□ -1.59
CPSF6-206ENST00000550987 RLN1P04808 185 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 CA3P07451 260 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 ZFYP08048 801 aaPredicted RBP5.09□□□□□ -1.59
CPSF6-206ENST00000550987 RAB40ALP0C0E4 278 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 HLA-DPA1P20036 260 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 SSTR2P30874 369 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 GNL1P36915 607 aaPredicted RBP5.09□□□□□ -1.59
CPSF6-206ENST00000550987 DSC1Q08554 894 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 AP1B1Q10567 949 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 MEP1BQ16820 701 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 TWISTNBQ3B726 338 aaPredicted RBP5.09□□□□□ -1.59
CPSF6-206ENST00000550987 CCNI2Q6ZMN8 369 aaPredicted RBP5.09□□□□□ -1.59
CPSF6-206ENST00000550987 GBP6Q6ZN66 633 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 FJX1Q86VR8 437 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 NBPF5PQ86XG9 351 aaPredicted RBP5.09□□□□□ -1.59
CPSF6-206ENST00000550987 CHERPQ8IWX8 916 aaKnown RBP5.09□□□□□ -1.59
CPSF6-206ENST00000550987 DNAJC10Q8IXB1 793 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 C4orf19Q8IY42 314 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 ZNF34Q8IZ26 560 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 FIBINQ8TAL6 211 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 BBS10Q8TAM1 723 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 GRAPLQ8TC17 118 aaPredicted RBP5.09□□□□□ -1.59
CPSF6-206ENST00000550987 KRT35Q92764 455 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 SEMA4DQ92854 862 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 BSCL2Q96G97 398 aaPredicted RBP5.09□□□□□ -1.59
CPSF6-206ENST00000550987 PARK7Q99497 189 aaKnown RBP5.09□□□□□ -1.59
CPSF6-206ENST00000550987 FEVQ99581 238 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 MLPHQ9BV36 600 aaPredicted RBP5.09□□□□□ -1.59
CPSF6-206ENST00000550987 SF3B5Q9BWJ5 86 aaKnown RBP5.09□□□□□ -1.59
CPSF6-206ENST00000550987 DPAGT1Q9H3H5 408 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 VPS18Q9P253 973 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 RHCGQ9UBD6 479 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 ITGA11Q9UKX5 1188 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 CDH7Q9ULB5 785 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 RNF150Q9ULK6 438 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 PADI3Q9ULW8 664 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 YIPF1Q9Y548 306 aa5.09□□□□□ -1.59
CPSF6-206ENST00000550987 MTORP42345 2549 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 EDC4Q6P2E9 1401 aaKnown RBP5.08□□□□□ -1.6
CPSF6-206ENST00000550987 RPAP1Q9BWH6 1393 aaPredicted RBP5.08□□□□□ -1.6
CPSF6-206ENST00000550987 A0A087WV48 116 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 PRSS51A0A1B0GVH4 220 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 OR2M5A3KFT3 312 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 OOEPA6NGQ2 149 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 INAFM1C9JVW0 142 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 GAGE7O76087 117 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 GAGE12FP0CL80 117 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 GAGE12GP0CL81 117 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 GAGE12IP0CL82 117 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 THEGLP0DJG4 465 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 MYL6BP14649 208 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 ACAT1P24752 427 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms