RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 PPCSQ9HAB8 311 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 FAM60AQ9NP50 221 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 FBXO6Q9NRD1 293 aaPredicted RBP12.93□□□□□ -0.34
NUP188-211ENST00000550219 MAP10Q9P2G4 905 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 ZNF180Q9UJW8 692 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 VPS4AQ9UN37 437 aa12.93□□□□□ -0.34
NUP188-211ENST00000550219 G3BP2Q9UN86 482 aaKnown RBP12.93□□□□□ -0.34
NUP188-211ENST00000550219 PCDHGA9Q9Y5G4 932 aaKnown RBP12.93□□□□□ -0.34
NUP188-211ENST00000550219 EXOC1LA0A1B0GW35 172 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 BLACEA4D250 179 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 QSOX1O00391 747 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 PRMT5O14744 637 aaPredicted RBP12.92□□□□□ -0.34
NUP188-211ENST00000550219 OR2B3O76000 313 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 CAPN1P07384 714 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 F7P08709 466 aaPredicted RBP12.92□□□□□ -0.34
NUP188-211ENST00000550219 CHRM5P08912 532 aaPredicted RBP12.92□□□□□ -0.34
NUP188-211ENST00000550219 GSTM1P09488 218 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 OR56A5P0C7T3 313 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 AGXTP21549 392 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 GNLYP22749 145 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 CD97P48960 835 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 GSTM4Q03013 218 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 PRR30Q53SZ7 412 aaPredicted RBP12.92□□□□□ -0.34
NUP188-211ENST00000550219 GRTP1Q5TC63 336 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 MLIPQ5VWP3 458 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 CNSTQ6PJW8 725 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 TAX1BP1Q86VP1 789 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 ZC3HC1Q86WB0 502 aaKnown RBP12.92□□□□□ -0.34
NUP188-211ENST00000550219 TDRPQ86YL5 185 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 RAB43Q86YS6 212 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 FDCSPQ8NFU4 85 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 PAFAH2Q99487 392 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 CCDC77Q9BR77 488 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 RHOJQ9H4E5 214 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 SPHK1Q9NYA1 384 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 CIDEBQ9UHD4 219 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 GPN3Q9UHW5 284 aaPredicted RBP12.92□□□□□ -0.34
NUP188-211ENST00000550219 CORO1CQ9ULV4 474 aaPredicted RBP12.92□□□□□ -0.34
NUP188-211ENST00000550219 PADI2Q9Y2J8 665 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 ZNF451Q9Y4E5 1061 aa12.92□□□□□ -0.34
NUP188-211ENST00000550219 A0A0J9YY10 115 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 ISM1B1AKI9 464 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 HCRTR1O43613 425 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 FAM155BO75949 473 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 ESR1P03372 595 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 HBQ1P09105 142 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 MSL3P1P0C860 447 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 CBSLP0DN79 551 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 CBSP35520 551 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 MSH2P43246 934 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 EIF3BP55884 814 aaKnown RBP12.91□□□□□ -0.34
NUP188-211ENST00000550219 CASP8Q14790 479 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 ZIC1Q15915 447 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 ZNF549Q6P9A3 640 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 ADGRD1Q6QNK2 874 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 LRIG3Q6UXM1 1119 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 FAM20CQ8IXL6 584 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 TBC1D21Q8IYX1 336 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 CNPY4Q8N129 248 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 ZBTB2Q8N680 514 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 OR2W6PQ8NHA6 318 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 DCAKDQ8WVC6 231 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 OR2A14Q96R47 310 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 RBBP8Q99708 897 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 NUDT9Q9BW91 350 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 ROPN1BQ9BZX4 212 aaPredicted RBP12.91□□□□□ -0.34
NUP188-211ENST00000550219 SPRTNQ9H040 489 aaPredicted RBP12.91□□□□□ -0.34
NUP188-211ENST00000550219 ROPN1Q9HAT0 212 aaPredicted RBP12.91□□□□□ -0.34
NUP188-211ENST00000550219 TXLNGQ9NUQ3 528 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 EURLQ9NYK6 297 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 DHCR7Q9UBM7 475 aaKnown RBP12.91□□□□□ -0.34
NUP188-211ENST00000550219 NDOR1Q9UHB4 597 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 CRYL1Q9Y2S2 319 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 COMMD10Q9Y6G5 202 aa12.91□□□□□ -0.34
NUP188-211ENST00000550219 SLC5A10A0PJK1 596 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 HMX2A2RU54 273 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 CLEC18AA5D8T8 446 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 POC1B-GALNT4F8VUJ3 575 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 ZSCAN9O15535 394 aaPredicted RBP12.9□□□□□ -0.34
NUP188-211ENST00000550219 DPM1O60762 260 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 AGFG2O95081 481 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 CTSBP07858 339 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 INHBAP08476 426 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 PKMP14618 531 aaKnown RBP12.9□□□□□ -0.34
NUP188-211ENST00000550219 CD9P21926 228 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 ACADLP28330 430 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 PEBP1P30086 187 aaKnown RBP12.9□□□□□ -0.34
NUP188-211ENST00000550219 SPRP35270 261 aaPredicted RBP12.9□□□□□ -0.34
NUP188-211ENST00000550219 SERPINB9P50453 376 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 RRADP55042 308 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 FOXL2P58012 376 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 CTSL3PQ5NE16 218 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 ZNF385CQ66K41 422 aaPredicted RBP12.9□□□□□ -0.34
NUP188-211ENST00000550219 CLEC18BQ6UXF7 455 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 MRGPREQ86SM8 312 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 C2orf73Q8N5S3 287 aaPredicted RBP12.9□□□□□ -0.34
NUP188-211ENST00000550219 ZNF655Q8N720 491 aaPredicted RBP12.9□□□□□ -0.34
NUP188-211ENST00000550219 CLEC18CQ8NCF0 446 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 OR5K2Q8NHB8 316 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 CFAP61Q8NHU2 1237 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms