RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	DUSP3	P51452	185 aa	Predicted RBP	11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	SH3BP2	P78314	561 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	PCDH1	Q08174	1060 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	CHIT1	Q13231	466 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	LAPTM5	Q13571	262 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	SF1	Q15637	639 aa	Known RBP	11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	TBCC	Q15814	346 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	HIST2H2AC	Q16777	129 aa	Predicted RBP	11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	ZXDC	Q2QGD7	858 aa	Predicted RBP	11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	GGTA1P	Q4G0N0	100 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	XKR6	Q5GH73	641 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	LIPJ	Q5W064	366 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	CES4A	Q5XG92	561 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	ICE2	Q659A1	982 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	HIST2H2AA3	Q6FI13	130 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	ANKRD12	Q6UB98	2062 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	TMPRSS11B	Q86T26	416 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	SFTPA2	Q8IWL1	248 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	CLYBL	Q8N0X4	340 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	LSMEM2	Q8N112	164 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	TBC1D19	Q8N5T2	526 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	ZNF781	Q8N8C0	355 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	FAM181A	Q8N9Y4	354 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	LINC01555	Q8NAE3	123 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	KNL1	Q8NG31	2342 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	OR4F6	Q8NGB9	312 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	OR2I1P	Q8NGU4	316 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	SLC5A11	Q8WWX8	675 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	JPH3	Q8WXH2	748 aa	Predicted RBP	11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	REPS1	Q96D71	796 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	MOCOS	Q96EN8	888 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	PTCD3	Q96EY7	689 aa	Known RBP	11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	AHCYL2	Q96HN2	611 aa	Known RBP	11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	OR4K3	Q96R72	315 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	EFCAB11	Q9BUY7	163 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	SLC29A3	Q9BZD2	475 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	C20orf27	Q9GZN8	174 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	ZMYND15	Q9H091	742 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	PELI2	Q9HAT8	420 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	PRM3	Q9NNZ6	103 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	DNAAF2	Q9NVR5	837 aa	Known RBP	11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	KCNK4	Q9NYG8	393 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	PSD3	Q9NYI0	1048 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	LRIT1	Q9P2V4	623 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	SNX6	Q9UNH7	406 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	TRAF6	Q9Y4K3	522 aa		11.22	□□□□□ -0.61
CNOT2-223	ENST00000550160	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	TRIO	O75962	3097 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160		A0A1W2PPV9	198 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	TRPC5OS	A6NMA1	111 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160		E7EQ34	232 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	TRIM38	O00635	465 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	UBFD1	O14562	309 aa	Known RBP	11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	PPM1D	O15297	605 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	FLRT2	O43155	660 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	SIGLEC6	O43699	453 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	OR4F21	O95013	312 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	KRT6A	P02538	564 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	KRT6B	P04259	564 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	PROS1	P07225	676 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	FGF4	P08620	206 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	GIMD1	P0DJR0	217 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	C1GALT1C1L	P0DN25	315 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	KIT	P10721	976 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	UROS	P10746	265 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	JUP	P14923	745 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	PNLIP	P16233	465 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	CXCR2	P25025	360 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	ARRB2	P32121	409 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	GRK3	P35626	688 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	KRT6C	P48668	564 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	PHEX	P78562	749 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	GPLD1	P80108	840 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	DAB2	P98082	770 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	PRDX1	Q06830	199 aa	Known RBP	11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	SPEM2	Q0P670	501 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	TRAF3	Q13114	568 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	SLC14A1	Q13336	389 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	CSRP2	Q16527	193 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	ATG9B	Q674R7	924 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	SYVN1	Q86TM6	617 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	ZNF761	Q86XN6	746 aa	Predicted RBP	11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	ADGRF3	Q8IZF5	1079 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	KRT78	Q8N1N4	520 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	EID2	Q8N6I1	236 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	CDYL2	Q8N8U2	506 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	L3MBTL4	Q8NA19	623 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	OR52B6	Q8NGF0	335 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	OR2A1	Q8NGT9	310 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	METTL6	Q8TCB7	284 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	NEIL2	Q969S2	332 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	UBE2E3	Q969T4	207 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	APOLD1	Q96LR9	279 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	CCT7	Q99832	543 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	EDEM2	Q9BV94	578 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	PITHD1	Q9GZP4	211 aa	Predicted RBP	11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	NPHS2	Q9NP85	383 aa		11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	MRPS30	Q9NP92	439 aa	Known RBP	11.21	□□□□□ -0.61
CNOT2-223	ENST00000550160	SEMA4G	Q9NTN9	838 aa		11.21	□□□□□ -0.61

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