RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 CCDC170Q8IYT3 715 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 OR13J1Q8NGT2 312 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 HDAC10Q969S8 669 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 RAD51AP1Q96B01 352 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 MVB12AQ96EY5 273 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 CCDC120Q96HB5 630 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 LURAP1Q96LR2 239 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 IL17FQ96PD4 163 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 FAM118BQ9BPY3 351 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 MESP1Q9BRJ9 268 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 RAB11FIP5Q9BXF6 653 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 TGIF2Q9GZN2 237 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 PLA2G3Q9NZ20 509 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 PTGFRNQ9P2B2 879 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 ZC3H7BQ9UGR2 993 aaKnown RBP9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 SLC39A10Q9ULF5 831 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 CDC14AQ9UNH5 594 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 MRPS2Q9Y399 296 aaKnown RBP9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 MAU2Q9Y6X3 613 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 PKDREJQ9NTG1 2253 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 LOC102723996A0A087X1L8 192 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 LOC105369274A0A096LPK9 316 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 IGHV1-45A0A0A0MS14 117 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 LOC102723532A0A0G2JNH3 316 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 MACROD2A1Z1Q3 448 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 ERI2A8K979 691 aaKnown RBP9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 RASAL1O95294 804 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 C1orf105O95561 183 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 GOT2P00505 430 aaKnown RBP9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 COX6A1P12074 109 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 CXCR2P25025 360 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 ADRA1DP25100 572 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 MST1P26927 711 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 CSE1LP55060 971 aaKnown RBP9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 AP2B1P63010 937 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 MUM1Q2TAK8 710 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 PRTGQ2VWP7 1150 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 VWA2Q5GFL6 755 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 TSTD2Q5T7W7 516 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 ZNF534Q76KX8 674 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 RNF44Q7L0R7 432 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 ZNF295-AS1Q8N0V1 137 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 OR4N4Q8N0Y3 316 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 DTWD1Q8N5C7 304 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 FAM71DQ8N9W8 422 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 OR2L3Q8NG85 312 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 OR2A1Q8NGT9 310 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 OR4L1Q8NH43 312 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 CFAP61Q8NHU2 1237 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 BRIX1Q8TDN6 353 aaKnown RBP9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 PEX13Q92968 403 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 C8orf44Q96CB5 159 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 MRFAP1L1Q96HT8 127 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 MAGEB10Q96LZ2 347 aaPredicted RBP9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 SEC14L3Q9UDX4 400 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 TFR2Q9UP52 801 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 MRFAP1Q9Y605 127 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 FAM169AQ9Y6X4 670 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 SCN2AQ99250 2005 aa9.38□□□□□ -0.91
TRAFD1-207ENST00000550051 F8P00451 2351 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 PCNX1Q96RV3 2341 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 NCOA6Q14686 2063 aaPredicted RBP9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 HEATR5BQ9P2D3 2071 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 TRGV8A0A0C4DH27 118 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 A0A1W2PPV9 198 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 OR2A25A4D2G3 310 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 IQCF5A8MTL0 148 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 IDSB3KWA1 339 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 KPNA5O15131 536 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 PRPF4O43172 522 aaKnown RBP eCLIP9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 PRAMEF2O60811 474 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 WFS1O76024 890 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 SUN1O94901 812 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 UNC5CO95185 931 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 WDPCPO95876 746 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 GAS8O95995 478 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 COX6B1P14854 86 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 SLC26A3P40879 764 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 RELAQ04206 551 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 CDH17Q12864 832 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 NAA25Q14CX7 972 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 SPA17Q15506 151 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 CCDC38Q502W7 563 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 FASTKD1Q53R41 847 aaKnown RBP9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 AADACL2Q6P093 401 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 AFTPHQ6ULP2 937 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 RAB42Q8N4Z0 105 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 METTL27Q8N6F8 245 aaPredicted RBP9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 OR52K1Q8NGK4 314 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 SLC35B2Q8TB61 432 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 ALG3Q92685 438 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 IMMP1LQ96LU5 166 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 MIPEPQ99797 713 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 TRIM8Q9BZR9 551 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 ZNF700Q9H0M5 742 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 RIC8BQ9NVN3 520 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 PIH1D1Q9NWS0 290 aaKnown RBP9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 STMN3Q9NZ72 180 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 SLC2A6Q9UGQ3 507 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 196.2 ms