RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 LACRTQ9GZZ8 138 aa12.96□□□□□ -0.33
TROAP-211ENST00000549891 ETNK1Q9HBU6 452 aa12.96□□□□□ -0.33
TROAP-211ENST00000549891 CDC14AQ9UNH5 594 aa12.96□□□□□ -0.33
TROAP-211ENST00000549891 R3HDM2Q9Y2K5 976 aaKnown RBP12.96□□□□□ -0.33
TROAP-211ENST00000549891 TCAF1Q9Y4C2 921 aa12.96□□□□□ -0.33
TROAP-211ENST00000549891 IGLV3-12A0A075B6K2 115 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 A0A0J9YVX5 310 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 ARHGAP10A1A4S6 786 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 PRSS44E7EML9 344 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 CD3EAPO15446 510 aaKnown RBP12.95□□□□□ -0.34
TROAP-211ENST00000549891 PHF2O75151 1096 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 VPS26AO75436 327 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 KLHL18O94889 574 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 IFNB1P01574 187 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 EIF2S1P05198 315 aaKnown RBP12.95□□□□□ -0.34
TROAP-211ENST00000549891 FBLP22087 321 aaKnown RBP12.95□□□□□ -0.34
TROAP-211ENST00000549891 CMPK1P30085 196 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 EMP3P54852 163 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 SEMA3AQ14563 771 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 ATG9BQ674R7 924 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 SP5Q6BEB4 398 aaPredicted RBP12.95□□□□□ -0.34
TROAP-211ENST00000549891 FRMPD2BQ6IN97 320 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 RNF44Q7L0R7 432 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 KRT222Q8N1A0 295 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 MPP5Q8N3R9 675 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 CATSPER1Q8NEC5 780 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 LKAAEAR1Q8TD35 194 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 RELTQ969Z4 430 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 MVB12AQ96EY5 273 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 CABS1Q96KC9 395 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 ZNF778Q96MU6 729 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 ZFYVE21Q9BQ24 234 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 SPATA7Q9P0W8 599 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 COPG2Q9UBF2 871 aa12.95□□□□□ -0.34
TROAP-211ENST00000549891 PACSIN2Q9UNF0 486 aaPredicted RBP12.95□□□□□ -0.34
TROAP-211ENST00000549891 NDUFS3O75489 264 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 APRTP07741 180 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 PRR35P0CG20 571 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 MYBL2P10244 700 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 RPS3P23396 243 aaKnown RBP eCLIP12.94□□□□□ -0.34
TROAP-211ENST00000549891 PSMB5P28074 263 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 BDKRB1P46663 353 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 TNFSF10P50591 281 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 KIF5AQ12840 1032 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 PCID2Q5JVF3 399 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 MTFR2Q6P444 385 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 CNSTQ6PJW8 725 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 RIPOR1Q6ZS17 1223 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 LDB1Q86U70 411 aaPredicted RBP12.94□□□□□ -0.34
TROAP-211ENST00000549891 PRSS58Q8IYP2 241 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 CCDC89Q8N998 374 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 OR2A1Q8NGT9 310 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 NR4A3Q92570 626 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 HAS2Q92819 552 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 C8orf44Q96CB5 159 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 P2RY12Q9H244 342 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 RAB6BQ9NRW1 208 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 C14orf105Q9NVL8 296 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 RIC8BQ9NVN3 520 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 UTP6Q9NYH9 597 aaKnown RBP12.94□□□□□ -0.34
TROAP-211ENST00000549891 PTGFRNQ9P2B2 879 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 SUCOQ9UBS9 1254 aaKnown RBP12.94□□□□□ -0.34
TROAP-211ENST00000549891 ZNF148Q9UQR1 794 aa12.94□□□□□ -0.34
TROAP-211ENST00000549891 MRPS2Q9Y399 296 aaKnown RBP12.94□□□□□ -0.34
TROAP-211ENST00000549891 REXO2Q9Y3B8 237 aaKnown RBP12.94□□□□□ -0.34
TROAP-211ENST00000549891 APCP25054 2843 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 LOC105369274A0A096LPK9 316 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 LOC102723532A0A0G2JNH3 316 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 A0A1W2PQ72 361 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 TCRBV7S2A1N4TA0A589 114 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 OR2A25A4D2G3 310 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 IDSB3KWA1 339 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 AP3B1O00203 1094 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 PFDN6O15212 129 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 LIASO43766 372 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 WFS1O76024 890 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 BMP10O95393 424 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 FTCDO95954 541 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 CRYABP02511 175 aaKnown RBP12.93□□□□□ -0.34
TROAP-211ENST00000549891 SERPINA7P05543 415 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 COX6A1P12074 109 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 ICAM2P13598 275 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 SOX11P35716 441 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 GRIA1P42261 906 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 EMP2P54851 167 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 ART3Q13508 389 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 DSG2Q14126 1118 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 OASLQ15646 514 aaKnown RBP12.93□□□□□ -0.34
TROAP-211ENST00000549891 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.93□□□□□ -0.34
TROAP-211ENST00000549891 VWA2Q5GFL6 755 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 SEL1L2Q5TEA6 688 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 ZNF324BQ6AW86 544 aaPredicted RBP12.93□□□□□ -0.34
TROAP-211ENST00000549891 GFRALQ6UXV0 394 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 OR4N4Q8N0Y3 316 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 DTWD1Q8N5C7 304 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 ACRBPQ8NEB7 543 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 SUN3Q8TAQ9 357 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 BRIX1Q8TDN6 353 aaKnown RBP12.93□□□□□ -0.34
TROAP-211ENST00000549891 ATG4AQ8WYN0 398 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 PHF12Q96QT6 1004 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms