RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 RP9Q8TA86 221 aaKnown RBP13.24□□□□□ -0.29
CALCOCO1-214ENST00000549613 KLHL29Q96CT2 875 aa13.24□□□□□ -0.29
CALCOCO1-214ENST00000549613 IL17FQ96PD4 163 aa13.24□□□□□ -0.29
CALCOCO1-214ENST00000549613 FRG2BQ96QU4 278 aa13.24□□□□□ -0.29
CALCOCO1-214ENST00000549613 KCNH6Q9H252 994 aa13.24□□□□□ -0.29
CALCOCO1-214ENST00000549613 ZNF385DQ9H6B1 395 aa13.24□□□□□ -0.29
CALCOCO1-214ENST00000549613 TM9SF3Q9HD45 589 aa13.24□□□□□ -0.29
CALCOCO1-214ENST00000549613 PRMT8Q9NR22 394 aaPredicted RBP13.24□□□□□ -0.29
CALCOCO1-214ENST00000549613 TMEM45AQ9NWC5 275 aa13.24□□□□□ -0.29
CALCOCO1-214ENST00000549613 SCHIP1Q9P0W5 487 aaPredicted RBP13.24□□□□□ -0.29
CALCOCO1-214ENST00000549613 TAAR2Q9P1P5 351 aa13.24□□□□□ -0.29
CALCOCO1-214ENST00000549613 PLAGL1Q9UM63 463 aa13.24□□□□□ -0.29
CALCOCO1-214ENST00000549613 COPG1Q9Y678 874 aaKnown RBP13.24□□□□□ -0.29
CALCOCO1-214ENST00000549613 A6NCN8 305 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 CFAP73A6NFT4 308 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 OR52A4PA6NMU1 304 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 E7EQ34 232 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 PSMD12O00232 456 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 VILLO15195 856 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 DNAJC8O75937 253 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 CSF2P04141 144 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 WNT1P04628 370 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 HSD3B1P14060 373 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 XRCC1P18887 633 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 HSD3B2P26439 372 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 PTPN4P29074 926 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 SHMT2P34897 504 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 FNTBP49356 437 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 MRPL19P49406 292 aaKnown RBP13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 ACADVLP49748 655 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 NCALDP61601 193 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 ABATP80404 500 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 NR6A1Q15406 480 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 TEAD4Q15561 434 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 AP5B1Q2VPB7 878 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 MED27Q6P2C8 311 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 SUSD1Q6UWL2 747 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 TRIM48Q8IWZ4 208 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 KRT78Q8N1N4 520 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 SDR16C5Q8N3Y7 309 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 SFRP1Q8N474 314 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 AVL9Q8NBF6 648 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 OR52E1Q8NGJ3 308 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 CCL4L1Q8NHW4 92 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 NEIL2Q969S2 332 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 MENTQ9BUN1 341 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 PITHD1Q9GZP4 211 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 PELI2Q9HAT8 420 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.23□□□□□ -0.291e-5■■■■□ 19.8
CALCOCO1-214ENST00000549613 NMRK1Q9NWW6 199 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 ZNF624Q9P2J8 865 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 SPASTQ9UBP0 616 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 APOBEC3BQ9UH17 382 aaKnown RBP13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 PNMA8BQ9ULN7 279 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 EIF3LQ9Y262 564 aaKnown RBP13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 PCDHB11Q9Y5F2 797 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 PTGDR2Q9Y5Y4 395 aa13.23□□□□□ -0.29
CALCOCO1-214ENST00000549613 TMEM221A6NGB7 291 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 NPIPB8E9PQR5 432 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 M0R296 226 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 PRAMEF4O60810 478 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 RSL1D1O76021 490 aaKnown RBP13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 CCNDBP1O95273 360 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 PDYNP01213 254 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 VIPP01282 170 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 COX4I1P13073 169 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 NME1P15531 152 aaKnown RBP13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 PRPH2P23942 346 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 SLC19A1P41440 591 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 C21orf59P57076 290 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 CORO7P57737 925 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 NXPH1P58417 271 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 PHEXP78562 749 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 DMWDQ09019 674 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 CSTF3Q12996 717 aaKnown RBP13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 STX5Q13190 355 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 CYLC2Q14093 348 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 SPRED3Q2MJR0 410 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 KIF19Q2TAC6 998 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 ZNF542PQ5EBM4 170 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 PRAMEF9Q5VWM5 478 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 TMPRSS11BQ86T26 416 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 GKN2Q86XP6 184 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 RBM12BQ8IXT5 1001 aaKnown RBP13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 FAM9CQ8IZT9 166 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 MIER2Q8N344 545 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 FNDC5Q8NAU1 212 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 OR2T11Q8NH01 316 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 C1orf216Q8TAB5 229 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 LCN9Q8WX39 176 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 MTFMTQ96DP5 389 aaKnown RBP13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 METTL2AQ96IZ6 378 aaKnown RBP13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 AIF1LQ9BQI0 150 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 LRMDAQ9H2I8 198 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 NT5DC2Q9H857 520 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 BRF2Q9HAW0 419 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 LRTM1Q9HBL6 345 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 POT1Q9NUX5 634 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 AIG1Q9NVV5 245 aa13.22□□□□□ -0.29
CALCOCO1-214ENST00000549613 C1orf109Q9NX04 203 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms