RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 OR4E2Q8NGC2 313 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 RP9Q8TA86 221 aaKnown RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF566Q969W8 418 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 UTP4Q969X6 686 aaKnown RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 RPRD1AQ96P16 312 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 CDX2Q99626 313 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 OLFM1Q99784 485 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 MIPEPQ99797 713 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 APOL6Q9BWW8 343 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 A4GALTQ9NPC4 353 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 MAN2C1Q9NTJ4 1040 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 LYARQ9NX58 379 aaKnown RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 A0A0D9SEW6 157 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 PRRG1O14668 218 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 CAPN9O14815 690 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 NUDT21O43809 227 aaKnown RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 BCAS2O75934 225 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 NAGAP17050 411 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 HNRNPA2B1P22626 353 aaKnown RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 PPIBP23284 216 aaKnown RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 ALDH3A1P30838 453 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 IL12RB1P42701 662 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 MAN2A2P49641 1150 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 MAP2K6P52564 334 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 HK3P52790 923 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 PHC1P78364 1004 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 IL9RQ01113 521 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 TAF11Q15544 211 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 PRSS53Q2L4Q9 553 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 ZXDCQ2QGD7 858 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 USP39Q53GS9 565 aaKnown RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 SPIN4Q56A73 249 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 LCN8Q6JVE9 175 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 SLCO4C1Q6ZQN7 724 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 SDCCAG8Q86SQ7 713 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 DENND1CQ8IV53 801 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 DCUN1D3Q8IWE4 304 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 SCN4BQ8IWT1 228 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 SAMD14Q8IZD0 417 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 KCT2Q8NC54 265 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 GPR26Q8NDV2 337 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 C1orf54Q8WWF1 131 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 NUS1Q96E22 293 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 BCL7BQ9BQE9 202 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 SLC32A1Q9H598 525 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 COG4Q9H9E3 785 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 CACNA2D2Q9NY47 1150 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 DEC1Q9P2X7 70 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 FBXL21Q9UKT6 434 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 TFR2Q9UP52 801 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 CORO2BQ9UQ03 480 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 ARL2BPQ9Y2Y0 163 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 USH1CQ9Y6N9 552 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 NUMBLQ9Y6R0 609 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 I3L4J1 428 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 RASSF9O75901 435 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 ALBP02768 609 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 OR4Q2P0C623 313 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 ITGALP20701 1170 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 PTX3P26022 381 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 HTR1EP28566 365 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 GALK1P51570 392 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 CLNS1AP54105 237 aaKnown RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 C3orf36Q3SXR2 165 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 SLC44A4Q53GD3 710 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 CCDC92Q53HC0 331 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 LY6G5CQ5SRR4 150 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 ATG14Q6ZNE5 492 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 D2HGDHQ8N465 521 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 DCLK2Q8N568 766 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 GALNT6Q8NCL4 622 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 SLC22A18Q96BI1 424 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 OR1F2PQ96R84 312 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 HOPXQ9BPY8 73 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 KCNK12Q9HB15 430 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 SEBOXQ9HB31 216 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 THSD1Q9NS62 852 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 TCRBV3S1A0A5B6 114 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 OTOL1A6NHN0 477 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 ISM1B1AKI9 464 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 LSM1O15116 133 aaKnown RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 CCDC22O60826 627 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 OR4F21O95013 312 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 INMTO95050 263 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 ZIC2O95409 532 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 CKMT1AP12532 417 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 TGM1P22735 817 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 MGAT1P26572 445 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 ACTN2P35609 894 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 ADCY8P40145 1251 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 LSSP48449 732 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 RNF144AP50876 292 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 CDR1P51861 262 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 CDKN2DP55273 166 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 IFFO1Q0D2I5 559 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 GRSF1Q12849 480 aaKnown RBP eCLIP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 PDIA2Q13087 525 aaKnown RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 CRB2Q5IJ48 1285 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 OR4F3Q6IEY1 312 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms