RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 TRIM46Q7Z4K8 759 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 NLGN4XQ8N0W4 816 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 LKAAEAR1Q8TD35 194 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 TSSK3Q96PN8 268 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 AMBNQ9NP70 447 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 WWOXQ9NZC7 414 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 UBA2Q9UBT2 640 aaPredicted RBP13.36□□□□□ -0.27
HDAC7-228ENST00000548938 LOC100506127A0A0U1RQW1 187 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 LOC730098B7Z3J9 87 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 RGS13O14921 159 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 MRPS14O60783 128 aaKnown RBP13.35□□□□□ -0.27
HDAC7-228ENST00000548938 GLUD1P00367 558 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 FABP3P05413 133 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 TACR2P21452 398 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 RPS14P62263 151 aaKnown RBP13.35□□□□□ -0.27
HDAC7-228ENST00000548938 NPRL3Q12980 569 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 TIGD6Q17RP2 521 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 VASH1Q7L8A9 365 aaPredicted RBP13.35□□□□□ -0.27
HDAC7-228ENST00000548938 YME1L1Q96TA2 773 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 PITX2Q99697 317 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 EMILIN2Q9BXX0 1053 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 FBXO44Q9H4M3 255 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 MARCH7Q9H992 704 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 PARVBQ9HBI1 364 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 PPT2Q9UMR5 302 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 MAN2B2Q9Y2E5 1009 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 RAI2Q9Y5P3 530 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 VIPP01282 170 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 CR2P20023 1033 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 TACR1P25103 407 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 CAMK2GQ13555 558 aaPredicted RBP13.35□□□□□ -0.27
HDAC7-228ENST00000548938 MBOAT1Q6ZNC8 495 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 USP43Q70EL4 1123 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 MRPL10Q7Z7H8 261 aaKnown RBP13.35□□□□□ -0.27
HDAC7-228ENST00000548938 CARNMT1Q8N4J0 409 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 ELMO1Q92556 727 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 FBXO32Q969P5 355 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 TP53INP1Q96A56 240 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 ACPTQ9BZG2 426 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 CIPCQ9C0C6 399 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 ABCG8Q9H221 673 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 ASIC5Q9NY37 505 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 PLXNA3P51805 1871 aa13.35□□□□□ -0.27
HDAC7-228ENST00000548938 ANKRD34BA5PLL1 514 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 HAT1O14929 419 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 B4GALT3O60512 393 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 CCNKO75909 580 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 LRATO95237 230 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 DNTTP04053 509 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 HOXB6P17509 224 aaKnown RBP13.34□□□□□ -0.27
HDAC7-228ENST00000548938 SLC19A1P41440 591 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 DMPKQ09013 629 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 MGAT3Q09327 533 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 SMU1Q2TAY7 513 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 DEFB115Q30KQ5 88 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 GPR153Q6NV75 609 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 ZCCHC8Q6NZY4 707 aaKnown RBP13.34□□□□□ -0.27
HDAC7-228ENST00000548938 AMER2Q8N7J2 671 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 PSD4Q8NDX1 1056 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 ULK4Q96C45 1275 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 AASDHPPTQ9NRN7 309 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 THUMPD1Q9NXG2 353 aaKnown RBP13.34□□□□□ -0.27
HDAC7-228ENST00000548938 ANKRD66B4E2M5 251 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 NDUFB5O43674 189 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 IGLV3-27P01718 113 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 SEMG1P04279 462 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 TYMPP19971 482 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 S100A5P33763 92 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 THPOP40225 353 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 KCNQ1P51787 676 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 P3H2Q8IVL5 708 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 FCGR1BQ92637 280 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 HSH2DQ96JZ2 352 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 BOCQ9BWV1 1114 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 CD244Q9BZW8 370 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 NXF2Q9GZY0 626 aaKnown RBP13.34□□□□□ -0.27
HDAC7-228ENST00000548938 OR51E2Q9H255 320 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 SRRDQ9UH36 339 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 VPS4AQ9UN37 437 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 ZNF451Q9Y4E5 1061 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 PCDHGA6Q9Y5G7 932 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 TDRD15B5MCY1 1934 aaKnown RBP13.34□□□□□ -0.27
HDAC7-228ENST00000548938 GREB1Q4ZG55 1949 aa13.34□□□□□ -0.27
HDAC7-228ENST00000548938 RFXANKO14593 260 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 KMOO15229 486 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 CST5P28325 142 aaPredicted RBP13.33□□□□□ -0.27
HDAC7-228ENST00000548938 CD52P31358 61 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 SLC6A4P31645 630 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 CA5AP35218 305 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 ZNF45Q02386 682 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 PRKCDQ05655 676 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 TBCEQ15813 527 aaPredicted RBP13.33□□□□□ -0.27
HDAC7-228ENST00000548938 CPSF6Q16630 551 aaKnown RBP eCLIP13.33□□□□□ -0.27
HDAC7-228ENST00000548938 PTRHD1Q6GMV3 140 aaKnown RBP13.33□□□□□ -0.27
HDAC7-228ENST00000548938 FAHD1Q6P587 224 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.33□□□□□ -0.27
HDAC7-228ENST00000548938 SLC46A3Q7Z3Q1 461 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 CHCHD4Q8N4Q1 142 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 ATAD1Q8NBU5 361 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 LILRB4Q8NHJ6 448 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms