RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 AVILO75366 819 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 VPS41P49754 854 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 TERF1P54274 439 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 ACSBG2Q5FVE4 666 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 WASHC2DQ5SRD0 308 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 ANKRD22Q5VYY1 191 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 ARMC3Q5W041 872 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 KIRREL2Q6UWL6 708 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 SDCCAG8Q86SQ7 713 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 CUZD1Q86UP6 607 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 CILP2Q8IUL8 1156 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 OR4N4Q8N0Y3 316 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 MAGEC3Q8TD91 643 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 C10orf90Q96M02 699 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 MESP1Q9BRJ9 268 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 SYNPO2LQ9H987 977 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 HOMER3Q9NSC5 361 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 CUEDC1Q9NWM3 386 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 IL1RAPL1Q9NZN1 696 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 CSAG2Q9Y5P2 127 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 MAU2Q9Y6X3 613 aa16.62■□□□□ 0.25
CHMP1A-205ENST00000548650 POLEQ07864 2286 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 HYKKA2RU49 373 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 PSIP1O75475 530 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 F7P08709 466 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 CCZ1BP86790 482 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 CCZ1P86791 482 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 GPS1Q13098 491 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 NAA25Q14CX7 972 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 NR6A1Q15406 480 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 RBBP7Q16576 425 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 EIF2S3LQ2VIR3 472 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 FAM214AQ32MH5 1076 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 TUBB8Q3ZCM7 444 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 HIST2H2BCQ6DN03 193 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 TTC27Q6P3X3 843 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 CAND1Q86VP6 1230 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 ZADH2Q8N4Q0 377 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 CISD2Q8N5K1 135 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 OR9A1PQ8NGU1 263 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 GIMAP7Q8NHV1 300 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 ZFYVE21Q9BQ24 234 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 WDR77Q9BQA1 342 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 DPH7Q9BTV6 452 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 ACAT2Q9BWD1 397 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 SEMA3GQ9NS98 782 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 NTNG1Q9Y2I2 539 aa16.61■□□□□ 0.25
CHMP1A-205ENST00000548650 TEX15Q9BXT5 2789 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 IGKV1-8A0A0C4DH67 115 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 PFDN6O15212 129 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 PKMP14618 531 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 PAMP19021 973 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 CMPK1P30085 196 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 CLCN7P51798 805 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 PRTGQ2VWP7 1150 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 KLHL38Q2WGJ6 581 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 ZNF470Q6ECI4 717 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 NEPROQ6NW34 567 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 IGFL2Q6UWQ7 119 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 OR11G2Q8NGC1 345 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 PPP4R1Q8TF05 950 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 SMPDL3AQ92484 453 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 SLC30A3Q99726 388 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 BARD1Q99728 777 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 CRB3Q9BUF7 120 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 ZNF304Q9HCX3 659 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 INTS10Q9NVR2 710 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 MED16Q9Y2X0 877 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 NOTCH2Q04721 2471 aa16.6■□□□□ 0.25
CHMP1A-205ENST00000548650 CPAMD8Q8IZJ3 1885 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 IGLV3-12A0A075B6K2 115 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 PHF2O75151 1096 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 USP1O94782 785 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 CBX6O95503 412 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 CHRM3P20309 590 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 KLC1Q07866 573 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 Q0VFX4 171 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 ARHGAP19Q14CB8 494 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 HIF1AQ16665 826 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 MUM1Q2TAK8 710 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 ANKRD20A4Q4UJ75 823 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 PRMT9Q6P2P2 845 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 CASC4Q6P4E1 433 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 SUSD1Q6UWL2 747 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 PAQR7Q86WK9 346 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 SPNS2Q8IVW8 549 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 LRRC8AQ8IWT6 810 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 PRR7Q8TB68 274 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 STT3BQ8TCJ2 826 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 ZNF669Q96BR6 464 aaPredicted RBP16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 PLCD4Q9BRC7 762 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 FAM114A2Q9NRY5 505 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 STOX2Q9P2F5 926 aaPredicted RBP16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 ZC3H7BQ9UGR2 993 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 NOVA2Q9UNW9 492 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 VPS9D1Q9Y2B5 631 aa16.59■□□□□ 0.25
CHMP1A-205ENST00000548650 ZCWPW2A0A1B0GU75 182 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 FAM237BA0A1B0GVD1 139 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 E5RI56 91 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 H0YGG7 62 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms