RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 PAMP19021 973 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 TPSB2P20231 275 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 ITGAXP20702 1163 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 RPS3P23396 243 aaKnown RBP eCLIP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 CCNFP41002 786 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 CCZ1BP86790 482 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 CCZ1P86791 482 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 CTBP1Q13363 440 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 THOC5Q13769 683 aaKnown RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 DHX34Q14147 1143 aaKnown RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 FASTKQ14296 549 aaKnown RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 KCNJ11Q14654 390 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 GRM7Q14831 915 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 TPSAB1Q15661 275 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 INPP5JQ15735 1006 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 KLHL38Q2WGJ6 581 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 FAM214AQ32MH5 1076 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 ANKRD20A4Q4UJ75 823 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 PRR30Q53SZ7 412 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 TCTE1Q5JU00 501 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 DCAF10Q5QP82 559 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 RNF187Q5TA31 235 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 SLC6A19Q695T7 634 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 FBXO42Q6P3S6 717 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 SUSD1Q6UWL2 747 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 PPP1R32Q7Z5V6 425 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 CAND1Q86VP6 1230 aaKnown RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 PRSS58Q8IYP2 241 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 GALNT16Q8N428 558 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 DTWD1Q8N5C7 304 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 CISD2Q8N5K1 135 aaKnown RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 RBMXL3Q8N7X1 1067 aaKnown RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 TTC29Q8NA56 475 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 OR2L3Q8NG85 312 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 OR2A1Q8NGT9 310 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 MAGEC3Q8TD91 643 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 DENND1AQ8TEH3 1009 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 C19orf60Q96EN9 201 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 SMAD5Q99717 465 aaKnown RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 YIPF2Q9BWQ6 316 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 RAB11FIP5Q9BXF6 653 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 MRM3Q9HC36 420 aaKnown RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 LRRC4CQ9HCJ2 640 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 CUTCQ9NTM9 273 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 SAMD15Q9P1V8 674 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 SOX13Q9UN79 622 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 PCDHGB7Q9Y5F8 929 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 MRFAP1Q9Y605 127 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 LOC105369274A0A096LPK9 316 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 LOC102723532A0A0G2JNH3 316 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 FAM237BA0A1B0GVD1 139 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 BLACEA4D250 179 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 ESPNB1AK53 854 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 TCP11X1B4DZS4 312 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 AGPSO00116 658 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 DSCR3O14972 297 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 NRP2O60462 931 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 SORBS2O94875 1100 aaKnown RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 AGFG2O95081 481 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 MATN4O95460 622 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 SYF2O95926 243 aaKnown RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 ALBP02768 609 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 ALPPP05187 535 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 OGNP20774 298 aaKnown RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 ITGA3P26006 1051 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 CMPK1P30085 196 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 RPA3P35244 121 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 COILP38432 576 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 GLRBP48167 497 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 MYBPC3Q14896 1274 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 NKG7Q16617 165 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 TYSND1Q2T9J0 566 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 EIF2S3LQ2VIR3 472 aaKnown RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 FHL5Q5TD97 284 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 VWA5B1Q5TIE3 1220 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 YOD1Q5VVQ6 348 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 ZNF470Q6ECI4 717 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 KIAA0930Q6ICG6 404 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 FRMPD2BQ6IN97 320 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 CCDC137Q6PK04 289 aaKnown RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 CENPUQ71F23 418 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 HPS6Q86YV9 775 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 CILP2Q8IUL8 1156 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 DENND6AQ8IWF6 608 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 OR4N4Q8N0Y3 316 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 ZADH2Q8N4Q0 377 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 Q8NA96 180 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 GALNT11Q8NCW6 608 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 OR9A1PQ8NGU1 263 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 PNPLA2Q96AD5 504 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 ZNF669Q96BR6 464 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 PBKQ96KB5 322 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 DPH7Q9BTV6 452 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 ILKAPQ9H0C8 392 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 CCDC68Q9H2F9 335 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 SOX17Q9H6I2 414 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 ZNF552Q9H707 407 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 ZBTB20Q9HC78 741 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms