RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 H3BMM5 538 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 MYO1CO00159 1063 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 IGHEP01854 428 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 EIF2S1P05198 315 aaKnown RBP12.75□□□□□ -0.37
CPSF6-204ENST00000547486 RNF224P0DH78 156 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 PIM1P11309 404 aaPredicted RBP12.75□□□□□ -0.37
CPSF6-204ENST00000547486 GP1BBP13224 206 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 COILP38432 576 aaPredicted RBP12.75□□□□□ -0.37
CPSF6-204ENST00000547486 SARNPP82979 210 aaKnown RBP12.75□□□□□ -0.37
CPSF6-204ENST00000547486 DHX34Q14147 1143 aaKnown RBP12.75□□□□□ -0.37
CPSF6-204ENST00000547486 EIF2S3LQ2VIR3 472 aaKnown RBP12.75□□□□□ -0.37
CPSF6-204ENST00000547486 FAM214AQ32MH5 1076 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 CRB2Q5IJ48 1285 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 ZNF470Q6ECI4 717 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 RNF44Q7L0R7 432 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 REXO1L1PQ8IX06 675 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 RAB42Q8N4Z0 105 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 CISD2Q8N5K1 135 aaKnown RBP12.75□□□□□ -0.37
CPSF6-204ENST00000547486 TTC29Q8NA56 475 aaPredicted RBP12.75□□□□□ -0.37
CPSF6-204ENST00000547486 MCUQ8NE86 351 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 GIMAP7Q8NHV1 300 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 NACC2Q96BF6 587 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 ZNF669Q96BR6 464 aaPredicted RBP12.75□□□□□ -0.37
CPSF6-204ENST00000547486 SERPINB12Q96P63 405 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 FBXO6Q9NRD1 293 aaPredicted RBP12.75□□□□□ -0.37
CPSF6-204ENST00000547486 CCDC88CQ9P219 2028 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 B3GNT3Q9Y2A9 372 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 MRFAP1Q9Y605 127 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 H0YGG7 62 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 PFDN6O15212 129 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 MLNP12872 115 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 ARF3P61204 181 aaPredicted RBP12.74□□□□□ -0.37
CPSF6-204ENST00000547486 Q0VFX4 171 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 AIMP2Q13155 320 aaKnown RBP12.74□□□□□ -0.37
CPSF6-204ENST00000547486 CUL1Q13616 776 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 CYP1B1Q16678 543 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 PRTGQ2VWP7 1150 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 FHL5Q5TD97 284 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 PRAMEF13Q5VWM6 474 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 ARMC3Q5W041 872 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 HIST2H2BCQ6DN03 193 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 CCDC137Q6PK04 289 aaKnown RBP12.74□□□□□ -0.37
CPSF6-204ENST00000547486 CYHR1Q6ZMK1 362 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 LAPTM4BQ86VI4 370 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 PPFIBP2Q8ND30 876 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 COG1Q8WTW3 980 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 SMPDL3AQ92484 453 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 PBKQ96KB5 322 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 SIGLEC10Q96LC7 697 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 C10orf90Q96M02 699 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 PLCD4Q9BRC7 762 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 ZNF304Q9HCX3 659 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 ASF1BQ9NVP2 202 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 INTS10Q9NVR2 710 aaKnown RBP12.74□□□□□ -0.37
CPSF6-204ENST00000547486 SAMD15Q9P1V8 674 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 MAP10Q9P2G4 905 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 JRKLQ9Y4A0 524 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 CSAG2Q9Y5P2 127 aa12.74□□□□□ -0.37
CPSF6-204ENST00000547486 LRRK2Q5S007 2527 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 USP9XQ93008 2570 aaPredicted RBP12.73□□□□□ -0.37
CPSF6-204ENST00000547486 CTAGE9A4FU28 777 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 E5RI56 91 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 KIF5CO60282 957 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 USP1O94782 785 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 AGFG2O95081 481 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 SLC16A8O95907 504 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 ALPPP05187 535 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 PAMP19021 973 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 ITGA3P26006 1051 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 CMPK1P30085 196 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 RPA3P35244 121 aaPredicted RBP12.73□□□□□ -0.37
CPSF6-204ENST00000547486 SLC1A2P43004 574 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 MAGEA3P43357 314 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 SNRPNP63162 240 aaKnown RBP12.73□□□□□ -0.37
CPSF6-204ENST00000547486 PRDX1Q06830 199 aaKnown RBP12.73□□□□□ -0.37
CPSF6-204ENST00000547486 KLC1Q07866 573 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 THOC5Q13769 683 aaKnown RBP12.73□□□□□ -0.37
CPSF6-204ENST00000547486 VWA2Q5GFL6 755 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 Q6ZS92 163 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 CUZD1Q86UP6 607 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 PAQR7Q86WK9 346 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 PARP9Q8IXQ6 854 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 LRRC56Q8IYG6 542 aaPredicted RBP12.73□□□□□ -0.37
CPSF6-204ENST00000547486 PRSS58Q8IYP2 241 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 NAT8LQ8N9F0 302 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 OR11G2Q8NGC1 345 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 STT3BQ8TCJ2 826 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 ZNF480Q8WV37 535 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 ASB11Q8WXH4 323 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 OR2A5Q96R48 311 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 ZFYVE21Q9BQ24 234 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 LRRC4CQ9HCJ2 640 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 XAB2Q9HCS7 855 aaKnown RBP12.73□□□□□ -0.37
CPSF6-204ENST00000547486 MRPS30Q9NP92 439 aaKnown RBP12.73□□□□□ -0.37
CPSF6-204ENST00000547486 TAC3Q9UHF0 121 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 NTNG1Q9Y2I2 539 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 FAM169AQ9Y6X4 670 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 MAST4O15021 2626 aa12.73□□□□□ -0.37
CPSF6-204ENST00000547486 SHANK1Q9Y566 2161 aa12.72□□□□□ -0.37
CPSF6-204ENST00000547486 E7ENX8 843 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms