RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 CCDC74BQ96LY2 380 aa11.69□□□□□ -0.54
HDAC7-226ENST00000547259 NUDT22Q9BRQ3 303 aa11.69□□□□□ -0.54
HDAC7-226ENST00000547259 SLC12A9Q9BXP2 914 aa11.69□□□□□ -0.54
HDAC7-226ENST00000547259 TRIM54Q9BYV2 358 aa11.69□□□□□ -0.54
HDAC7-226ENST00000547259 ZMYND15Q9H091 742 aa11.69□□□□□ -0.54
HDAC7-226ENST00000547259 TFB2MQ9H5Q4 396 aaKnown RBP11.69□□□□□ -0.54
HDAC7-226ENST00000547259 POT1Q9NUX5 634 aa11.69□□□□□ -0.54
HDAC7-226ENST00000547259 SLC39A1Q9NY26 324 aa11.69□□□□□ -0.54
HDAC7-226ENST00000547259 KCNK4Q9NYG8 393 aa11.69□□□□□ -0.54
HDAC7-226ENST00000547259 XPR1Q9UBH6 696 aa11.69□□□□□ -0.54
HDAC7-226ENST00000547259 CPNE7Q9UBL6 633 aa11.69□□□□□ -0.54
HDAC7-226ENST00000547259 ANAPC2Q9UJX6 822 aa11.69□□□□□ -0.54
HDAC7-226ENST00000547259 OARD1Q9Y530 152 aa11.69□□□□□ -0.54
HDAC7-226ENST00000547259 IGHV1OR21-1A0A087WYE8 117 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 SUPT3HB4E1H0 165 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 PYCARD-AS1I3L0S3 204 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 GFYI3L273 518 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 DUX1O43812 170 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 KDM1AO60341 852 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 KERAO60938 352 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 SUPT3HO75486 399 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 S100BP04271 92 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-226ENST00000547259 RBP1P09455 135 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 HIST1H2AGP0C0S8 130 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-226ENST00000547259 CCL4P13236 92 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 CREB1P16220 341 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 HIST1H2ADP20671 130 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 CRHR1P34998 444 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 FASLGP48023 281 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 PPM1FP49593 454 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-226ENST00000547259 UBE2IP63279 158 aaKnown RBP11.68□□□□□ -0.54
HDAC7-226ENST00000547259 HHEXQ03014 270 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 PRKG2Q13237 762 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 KCNAB2Q13303 367 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 PLCL1Q15111 1095 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 PHKG1Q16816 387 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.68□□□□□ -0.54
HDAC7-226ENST00000547259 C16orf46Q6P387 395 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 SBSNQ6UWP8 590 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 CEACAM20Q6UY09 585 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 CDHR3Q6ZTQ4 885 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 TMPRSS9Q7Z410 1059 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 CCDC63Q8NA47 563 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 RHEBL1Q8TAI7 183 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 STAG3L4Q8TBR4 150 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 MCOLN3Q8TDD5 553 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 RAD51AP1Q96B01 352 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 HIST1H2AHQ96KK5 128 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 GPR78Q96P69 363 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 SLC38A3Q99624 504 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 HIST1H2AJQ99878 128 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 SELENOSQ9BQE4 189 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 H2AFJQ9BTM1 129 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 TRIM4Q9C037 500 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 MRPL46Q9H2W6 279 aaKnown RBP11.68□□□□□ -0.54
HDAC7-226ENST00000547259 EPB41L1Q9H4G0 881 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 PARVBQ9HBI1 364 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 SSU72Q9NP77 194 aaKnown RBP11.68□□□□□ -0.54
HDAC7-226ENST00000547259 KCNK9Q9NPC2 374 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 UTP6Q9NYH9 597 aaKnown RBP11.68□□□□□ -0.54
HDAC7-226ENST00000547259 NUDT4Q9NZJ9 180 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 TMEM216Q9P0N5 145 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 CIDEBQ9UHD4 219 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 POLG2Q9UHN1 485 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 GRID1Q9ULK0 1009 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 PDE10AQ9Y233 779 aa11.68□□□□□ -0.54
HDAC7-226ENST00000547259 SPTAN1Q13813 2472 aaKnown RBP11.67□□□□□ -0.54
HDAC7-226ENST00000547259 CCDC189A1A4V9 331 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 KRT87PA6NCN2 255 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 SYCE1LA8MT33 242 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 GUCA1CO95843 209 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 THRAP10827 490 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 HPDP32754 393 aaPredicted RBP11.67□□□□□ -0.54
HDAC7-226ENST00000547259 SRSF6Q13247 344 aaKnown RBP11.67□□□□□ -0.54
HDAC7-226ENST00000547259 GPR18Q14330 331 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 PPP1R3AQ16821 1122 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 CCDC153Q494R4 210 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 CCSMST1Q4G0I0 132 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 CRTC2Q53ET0 693 aaPredicted RBP11.67□□□□□ -0.54
HDAC7-226ENST00000547259 WDR74Q6RFH5 385 aaPredicted RBP11.67□□□□□ -0.54
HDAC7-226ENST00000547259 ISCA2Q86U28 154 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 GPSM1Q86YR5 675 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 RASGRP3Q8IV61 690 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 RBM12BQ8IXT5 1001 aaKnown RBP11.67□□□□□ -0.54
HDAC7-226ENST00000547259 RAB42Q8N4Z0 105 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 FBXO15Q8NCQ5 510 aaPredicted RBP11.67□□□□□ -0.54
HDAC7-226ENST00000547259 RCBTB1Q8NDN9 531 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 OR52E1Q8NGJ3 308 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 TCP10LQ8TDR4 215 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 DLG3Q92796 817 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 SLC45A3Q96JT2 553 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 ATOH8Q96SQ7 321 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 EGFL8Q99944 293 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 MRPL57Q9BQC6 102 aaKnown RBP11.67□□□□□ -0.54
HDAC7-226ENST00000547259 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.67□□□□□ -0.54
HDAC7-226ENST00000547259 KIR3DX1Q9H7L2 352 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 MED4Q9NPJ6 270 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 ARL15Q9NXU5 204 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 CD274Q9NZQ7 290 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 CPSF2Q9P2I0 782 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms