RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 HRASLS2Q9NWW9 162 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 KCNK4Q9NYG8 393 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 TAC3Q9UHF0 121 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 RNF215Q9Y6U7 377 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 ARID1BQ8NFD5 2236 aaPredicted RBP15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 GSAPA4D1B5 854 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 BTN3A3O00478 584 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 OR7A17O14581 309 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 PRICKLE3O43900 615 aaPredicted RBP15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 TGDSO95455 350 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 PROS1P07225 676 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 CHRNGP07510 517 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 TROVE2P10155 538 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 CXCR2P25025 360 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 CAPZBP47756 277 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 SH3BP2P78314 561 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 DAB2P98082 770 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 TRAF3Q13114 568 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 CHIT1Q13231 466 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 LAPTM5Q13571 262 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 SF1Q15637 639 aaKnown RBP15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 HIST2H2ACQ16777 129 aaPredicted RBP15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 SLC5A12Q1EHB4 618 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 XKR6Q5GH73 641 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 PAGE2BQ5JRK9 111 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 SH2D4BQ5SQS7 431 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 C10orf62Q5T681 223 aaPredicted RBP15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 CES4AQ5XG92 561 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 ICE2Q659A1 982 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 HIST2H2AA3Q6FI13 130 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 CPLX4Q7Z7G2 160 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 LRRC34Q8IZ02 419 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 CLYBLQ8N0X4 340 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 C2orf73Q8N5S3 287 aaPredicted RBP15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 L3MBTL4Q8NA19 623 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 OR52B6Q8NGF0 335 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 OR2A1Q8NGT9 310 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 JPH3Q8WXH2 748 aaPredicted RBP15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 NEIL2Q969S2 332 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 MOCOSQ96EN8 888 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 AHCYL2Q96HN2 611 aaKnown RBP15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 SIKE1Q9BRV8 207 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 SLC29A3Q9BZD2 475 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 C20orf27Q9GZN8 174 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 PITHD1Q9GZP4 211 aaPredicted RBP15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 RAB33BQ9H082 229 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 EPN3Q9H201 632 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 PELI2Q9HAT8 420 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 MRPS30Q9NP92 439 aaKnown RBP15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 SLCO1B3Q9NPD5 702 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 FGFR1OP2Q9NVK5 253 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 ACTR10Q9NZ32 417 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 VTI1BQ9UEU0 232 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 TRPS1Q9UHF7 1281 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 TRAF6Q9Y4K3 522 aa15.28■□□□□ 0.04
TRAFD1-203ENST00000547063 GPR179Q6PRD1 2367 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 GOLGA4Q13439 2230 aaKnown RBP15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 EME2A4GXA9 379 aaPredicted RBP15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 UBFD1O14562 309 aaKnown RBP15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 AZIN1O14977 448 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 DUX1O43812 170 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 C1GALT1C1LP0DN25 315 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 UROSP10746 265 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 CKMT1AP12532 417 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 HGFP14210 728 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 TSPAN8P19075 237 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 POLR2CP19387 275 aaPredicted RBP15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 ALDH4A1P30038 563 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 ARRB2P32121 409 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 CCR10P46092 362 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 PPM1FP49593 454 aaPredicted RBP15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 CCR8P51685 355 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 E2F2Q14209 437 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 PROX2Q3B8N5 592 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 AASDHQ4L235 1098 aaPredicted RBP15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 ATG9BQ674R7 924 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 NXPE4Q6UWF7 544 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 SLCO4C1Q6ZQN7 724 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 PRR23CQ6ZRP0 262 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 SYVN1Q86TM6 617 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 MYLK4Q86YV6 388 aaPredicted RBP15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 KRT78Q8N1N4 520 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 TBC1D19Q8N5T2 526 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 ZNF781Q8N8C0 355 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 OR2L3Q8NG85 312 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 OR4F6Q8NGB9 312 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 UBE2E3Q969T4 207 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 REPS1Q96D71 796 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 WDR34Q96EX3 536 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 CCT7Q99832 543 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 ACAT2Q9BWD1 397 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 TBC1D10AQ9BXI6 508 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 TRIM55Q9BYV6 548 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 TMEM184CQ9NVA4 438 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 ANKMY1Q9P2S6 941 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 EPHA6Q9UF33 1036 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 SNX7Q9UNH6 387 aa15.27■□□□□ 0.04
TRAFD1-203ENST00000547063 E7EQ34 232 aa15.26■□□□□ 0.03
TRAFD1-203ENST00000547063 CDX4O14627 284 aaPredicted RBP15.26■□□□□ 0.03
TRAFD1-203ENST00000547063 WFS1O76024 890 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms