RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 SOX1O00570 391 aaPredicted RBP11.58□□□□□ -0.56
CCDC38-202ENST00000546386 YY2O15391 372 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 RNGTTO60942 597 aaKnown RBP11.58□□□□□ -0.56
CCDC38-202ENST00000546386 PSIP1O75475 530 aaKnown RBP11.58□□□□□ -0.56
CCDC38-202ENST00000546386 NTRK1P04629 796 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 GSTM1P09488 218 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 CBSLP0DN79 551 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 MYCLP1P12525 358 aaPredicted RBP11.58□□□□□ -0.56
CCDC38-202ENST00000546386 CBSP35520 551 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 GTF2A1P52655 376 aaPredicted RBP11.58□□□□□ -0.56
CCDC38-202ENST00000546386 PTPN5P54829 565 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 RPS13P62277 151 aaKnown RBP11.58□□□□□ -0.56
CCDC38-202ENST00000546386 GSTM4Q03013 218 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 LIPEQ05469 1076 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 CDC16Q13042 620 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 SLC14A1Q13336 389 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 RBBP5Q15291 538 aaKnown RBP11.58□□□□□ -0.56
CCDC38-202ENST00000546386 TLR1Q15399 786 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 CLECL1Q8IZS7 167 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 PCYOX1LQ8NBM8 494 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 PATE1Q8WXA2 126 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 N4BP2L2Q92802 583 aaPredicted RBP11.58□□□□□ -0.56
CCDC38-202ENST00000546386 PDXPQ96GD0 296 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 PRAP1Q96NZ9 151 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 FCRL4Q96PJ5 515 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 CDCA3Q99618 268 aaPredicted RBP11.58□□□□□ -0.56
CCDC38-202ENST00000546386 CIB1Q99828 191 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 NTMT1Q9BV86 223 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 SLC17A9Q9BYT1 436 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 RDH14Q9HBH5 336 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.58□□□□□ -0.56
CCDC38-202ENST00000546386 CA14Q9ULX7 337 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 PPT2Q9UMR5 302 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 GNG14A0A1W2PPG7 69 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 ANKRD28O15084 1053 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 CPSF4O95639 269 aaKnown RBP11.57□□□□□ -0.56
CCDC38-202ENST00000546386 CDH1P12830 882 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 ADPRHP54922 357 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 CAMK2BQ13554 666 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 KIAA0040Q15053 153 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 NLRP8Q86W28 1048 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 C1orf52Q8N6N3 182 aaKnown RBP11.57□□□□□ -0.56
CCDC38-202ENST00000546386 FAM86B1Q8N7N1 296 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 SLCO4A1Q96BD0 722 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 MRGPRX1Q96LB2 322 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 C12orf66Q96MD2 445 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 VPS35Q96QK1 796 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 C1orf109Q9NX04 203 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 SCHIP1Q9P0W5 487 aaPredicted RBP11.57□□□□□ -0.56
CCDC38-202ENST00000546386 TMEM181Q9P2C4 612 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 SUFUQ9UMX1 484 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 TRIM38O00635 465 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 KRT6AP02538 564 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 KRT6BP04259 564 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 SDC1P18827 310 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 NDUFV2P19404 249 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 NFKBIAP25963 317 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 KRT6CP48668 564 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 TAP2Q03519 686 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 SLBPQ14493 270 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCDC38-202ENST00000546386 CLCA4Q14CN2 919 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 C16orf72Q14CZ0 275 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 WLSQ5T9L3 541 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 FAM46CQ5VWP2 391 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 OR7G3Q8NG95 312 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 OR4K1Q8NGD4 311 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 FIG4Q92562 907 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 UCN3Q969E3 161 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 MSLNLQ96KJ4 702 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 FERD3LQ96RJ6 166 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 NUSAP1Q9BXS6 441 aaKnown RBP11.57□□□□□ -0.56
CCDC38-202ENST00000546386 ALG2Q9H553 416 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 FGF22Q9HCT0 170 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 THEGQ9P2T0 379 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 ASXL3Q9C0F0 2248 aa11.57□□□□□ -0.56
CCDC38-202ENST00000546386 PLXNA2O75051 1894 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 ZNF106Q9H2Y7 1883 aaKnown RBP11.56□□□□□ -0.56
CCDC38-202ENST00000546386 CACNA1IQ9P0X4 2223 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 SAC3D1A6NKF1 404 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 SOBPA7XYQ1 873 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 H0Y858 1186 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 NME6O75414 186 aaPredicted RBP11.56□□□□□ -0.56
CCDC38-202ENST00000546386 PGRP06401 933 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 GSK3BP49841 420 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 EMX2Q04743 252 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 CAMK2GQ13555 558 aaPredicted RBP11.56□□□□□ -0.56
CCDC38-202ENST00000546386 MAPRE2Q15555 327 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 MAPKAPK3Q16644 382 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 SDE2Q6IQ49 451 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 ENPP7Q6UWV6 458 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 ANGPTL8Q6UXH0 198 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 TMEM184AQ6ZMB5 413 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 DHFR2Q86XF0 187 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 SNX19Q92543 992 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 DPH2Q9BQC3 489 aaPredicted RBP11.56□□□□□ -0.56
CCDC38-202ENST00000546386 LMAN2LQ9H0V9 348 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 ABCG4Q9H172 646 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 CARS2Q9HA77 564 aaKnown RBP11.56□□□□□ -0.56
CCDC38-202ENST00000546386 PFDN4Q9NQP4 134 aa11.56□□□□□ -0.56
CCDC38-202ENST00000546386 SLC25A37Q9NYZ2 338 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms