RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 LOC102723996A0A087X1L8 192 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 HYKKA2RU49 373 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 PRR35P0CG20 571 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 PIM1P11309 404 aaPredicted RBP11.96□□□□□ -0.49
COPS7A-221ENST00000546229 ACPPP15309 386 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 POU3F2P20265 443 aaPredicted RBP11.96□□□□□ -0.49
COPS7A-221ENST00000546229 STIP1P31948 543 aaKnown RBP11.96□□□□□ -0.49
COPS7A-221ENST00000546229 TNFSF10P50591 281 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 EMP3P54852 163 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 CRADDP78560 199 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 CDC16Q13042 620 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 DSG2Q14126 1118 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 ELOAQ14241 798 aaKnown RBP11.96□□□□□ -0.49
COPS7A-221ENST00000546229 TYSND1Q2T9J0 566 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 FASTKD1Q53R41 847 aaKnown RBP11.96□□□□□ -0.49
COPS7A-221ENST00000546229 VWA2Q5GFL6 755 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 ZNF425Q6IV72 752 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 PRMT9Q6P2P2 845 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 FBXO42Q6P3S6 717 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 LINC00696Q6ZRV3 163 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 PAQR7Q86WK9 346 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 SLC34A3Q8N130 599 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 MPP5Q8N3R9 675 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 UBL4BQ8N7F7 174 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 TTC29Q8NA56 475 aaPredicted RBP11.96□□□□□ -0.49
COPS7A-221ENST00000546229 OR6P1Q8NGX9 317 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 LPGAT1Q92604 370 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 RELTQ969Z4 430 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 RAD51AP1Q96B01 352 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 ALS2CR12Q96Q35 445 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 LMF1Q96S06 567 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 DESI2Q9BSY9 194 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 EPS8L2Q9H6S3 715 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 ZNF304Q9HCX3 659 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 EIF2B3Q9NR50 452 aaKnown RBP11.96□□□□□ -0.49
COPS7A-221ENST00000546229 RAB6BQ9NRW1 208 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 SPATA7Q9P0W8 599 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 GALPQ9UBC7 116 aa11.96□□□□□ -0.49
COPS7A-221ENST00000546229 IGHV1-45A0A0A0MS14 117 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 A0A0J9YVX5 310 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 ARHGEF33A8MVX0 844 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 MYO1CO00159 1063 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 CD3EAPO15446 510 aaKnown RBP11.95□□□□□ -0.5
COPS7A-221ENST00000546229 P2RX6O15547 441 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 FOXS1O43638 330 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 WISP2O76076 250 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 ZSCAN5DPP0CG00 497 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 NMBRP28336 390 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 ATP5DP30049 168 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 RPL22P35268 128 aaKnown RBP11.95□□□□□ -0.5
COPS7A-221ENST00000546229 SLC26A3P40879 764 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 TTPAP49638 278 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 PRAMEP78395 509 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 PCOLCEQ15113 449 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 INAQ16352 499 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 FAM214AQ32MH5 1076 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 AARS2Q5JTZ9 985 aaKnown RBP11.95□□□□□ -0.5
COPS7A-221ENST00000546229 PPP1R21Q6ZMI0 780 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 BRIX1Q8TDN6 353 aaKnown RBP11.95□□□□□ -0.5
COPS7A-221ENST00000546229 C1orf54Q8WWF1 131 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 ITLN2Q8WWU7 325 aaPredicted RBP11.95□□□□□ -0.5
COPS7A-221ENST00000546229 NR4A3Q92570 626 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 MARVELD3Q96A59 401 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 CNDP1Q96KN2 507 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 ZFYVE21Q9BQ24 234 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 PLCD4Q9BRC7 762 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 TSSK1BQ9BXA7 367 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 FRMD8P1Q9BZ68 369 aaPredicted RBP11.95□□□□□ -0.5
COPS7A-221ENST00000546229 UNKQ9C0B0 810 aaKnown RBP11.95□□□□□ -0.5
COPS7A-221ENST00000546229 TGIF2Q9GZN2 237 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 OLAHQ9NV23 265 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.95□□□□□ -0.5
COPS7A-221ENST00000546229 ZNF282Q9UDV7 671 aaPredicted RBP11.95□□□□□ -0.5
COPS7A-221ENST00000546229 GNPTGQ9UJJ9 305 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 C3orf18Q9UK00 162 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 SLC39A10Q9ULF5 831 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 RUVBL1Q9Y265 456 aaKnown RBP11.95□□□□□ -0.5
COPS7A-221ENST00000546229 MED16Q9Y2X0 877 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 FAM169AQ9Y6X4 670 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 HIVEP1P15822 2718 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 POLQO75417 2590 aa11.95□□□□□ -0.5
COPS7A-221ENST00000546229 IDSB3KWA1 339 aa11.94□□□□□ -0.5
COPS7A-221ENST00000546229 F8W8V4 182 aa11.94□□□□□ -0.5
COPS7A-221ENST00000546229 H0YGG7 62 aa11.94□□□□□ -0.5
COPS7A-221ENST00000546229 MAP2K7O14733 419 aa11.94□□□□□ -0.5
COPS7A-221ENST00000546229 FFAR3O14843 346 aa11.94□□□□□ -0.5
COPS7A-221ENST00000546229 GPR42O15529 346 aa11.94□□□□□ -0.5
COPS7A-221ENST00000546229 NIPSNAP2O75323 286 aa11.94□□□□□ -0.5
COPS7A-221ENST00000546229 JRKO75564 520 aa11.94□□□□□ -0.5
COPS7A-221ENST00000546229 IFNB1P01574 187 aa11.94□□□□□ -0.5
COPS7A-221ENST00000546229 APRTP07741 180 aa11.94□□□□□ -0.5
COPS7A-221ENST00000546229 GRNP28799 593 aaKnown RBP11.94□□□□□ -0.5
COPS7A-221ENST00000546229 CARSP49589 748 aaKnown RBP11.94□□□□□ -0.5
COPS7A-221ENST00000546229 NAP1L1P55209 391 aaKnown RBP11.94□□□□□ -0.5
COPS7A-221ENST00000546229 ADARP55265 1226 aaKnown RBP11.94□□□□□ -0.5
COPS7A-221ENST00000546229 KCNK10P57789 538 aa11.94□□□□□ -0.5
COPS7A-221ENST00000546229 ARF3P61204 181 aaPredicted RBP11.94□□□□□ -0.5
COPS7A-221ENST00000546229 TMED2Q15363 201 aa11.94□□□□□ -0.5
COPS7A-221ENST00000546229 HKDC1Q2TB90 917 aa11.94□□□□□ -0.5
COPS7A-221ENST00000546229 PCID2Q5JVF3 399 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms