RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 PDPK1O15530 556 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 AQP9O43315 295 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 ACSL4O60488 711 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 UGDHO60701 494 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 DDNO94850 711 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-225ENST00000545920 CLIC3O95833 236 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 BPNT1O95861 308 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 PTTG1O95997 202 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 ABCB1P08183 1280 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-225ENST00000545920 HTR1AP08908 422 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 HSD3B1P14060 373 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 SLC2A4P14672 509 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 ITGALP20701 1170 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 CD247P20963 164 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 TGM1P22735 817 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 HTR1BP28222 390 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 ELK4P28324 431 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 SERPINB1P30740 379 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 MC4RP32245 332 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 S100A3P33764 101 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 HMGCLP35914 325 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 GGT5P36269 586 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 HPCAL1P37235 193 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 OPRL1P41146 370 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 CASP2P42575 452 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 MAPK9P45984 424 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 BRCC3P46736 316 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 PPP3CCP48454 512 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 ALDH9A1P49189 494 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 HNMTP50135 292 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 GZMMP51124 257 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 HK3P52790 923 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 PCBP4P57723 403 aaKnown RBP6.3□□□□□ -1.4
SNHG1-225ENST00000545920 PHC1P78364 1004 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 PRKCDQ05655 676 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 RIPPLY1Q0D2K3 151 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 ELP6Q0PNE2 266 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 EFEMP1Q12805 493 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 SP140Q13342 867 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 ATP1A4Q13733 1029 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 KCNC3Q14003 757 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 EIF4HQ15056 248 aaKnown RBP6.3□□□□□ -1.4
SNHG1-225ENST00000545920 PON2Q15165 354 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 TBCEQ15813 527 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-225ENST00000545920 IMPG1Q17R60 797 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 ANKDD1AQ495B1 522 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 SLC39A12Q504Y0 691 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 CTSL3PQ5NE16 218 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 C10orf120Q5SQS8 335 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 KIAA1614Q5VZ46 1190 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 CPZQ66K79 652 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 RAP1GAP2Q684P5 730 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 OR2T5Q6IEZ7 315 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 LETMD1Q6P1Q0 360 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 SPESP1Q6UW49 350 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 SBSNQ6UWP8 590 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 MACC1Q6ZN28 852 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 FAM92BQ6ZTR7 304 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 USP43Q70EL4 1123 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 DET1Q7L5Y6 550 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 KIAA0907Q7Z7F0 614 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-225ENST00000545920 LDB1Q86U70 411 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-225ENST00000545920 SLCO6A1Q86UG4 719 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 LSRQ86X29 649 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-225ENST00000545920 ARMC8Q8IUR7 673 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 MFSD4AQ8N468 514 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 KBTBD8Q8NFY9 601 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 OR4F6Q8NGB9 312 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 OR2T29Q8NH02 315 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 RHOXF1Q8NHV9 184 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 DYNC2LI1Q8TCX1 351 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 MCOLN3Q8TDD5 553 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 EEF1AKMT1Q8WVE0 214 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 FIG4Q92562 907 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 MYDGFQ969H8 173 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 SLC38A4Q969I6 547 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 IGSF8Q969P0 613 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 ULK4Q96C45 1275 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 CMTM7Q96FZ5 175 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 TXNDC15Q96J42 360 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 FCRL1Q96LA6 429 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 SIGLEC11Q96RL6 698 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 EPYCQ99645 322 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 HTATIP2Q9BUP3 242 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 CD244Q9BZW8 370 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 AMBRA1Q9C0C7 1298 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 NAA50Q9GZZ1 169 aaKnown RBP6.3□□□□□ -1.4
SNHG1-225ENST00000545920 TNKS2Q9H2K2 1166 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 IPPKQ9H8X2 491 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 SPON1Q9HCB6 807 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 TRNAU1APQ9NX07 287 aaKnown RBP6.3□□□□□ -1.4
SNHG1-225ENST00000545920 ANKMY1Q9P2S6 941 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 KLF15Q9UIH9 416 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 AGO1Q9UL18 857 aaKnown RBP6.3□□□□□ -1.4
SNHG1-225ENST00000545920 NDRG4Q9ULP0 352 aaKnown RBP6.3□□□□□ -1.4
SNHG1-225ENST00000545920 PADI3Q9ULW8 664 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 SNX6Q9UNH7 406 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 FAM50BQ9Y247 325 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 TDRKHQ9Y2W6 561 aaKnown RBP6.3□□□□□ -1.4
SNHG1-225ENST00000545920 POLR3KQ9Y2Y1 108 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms