RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 FMO3P31513 532 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 UFM1P61960 85 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 GRIK2Q13002 908 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 C5orf34Q96MH7 638 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 WDR26Q9H7D7 661 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 DCLK1O15075 740 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 YAP1P46937 504 aaKnown RBP12.21□□□□□ -0.45
COL4A6-209ENST00000545689 BLKP51451 505 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 HMGCS1Q01581 520 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 DSC3Q14574 896 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 CCL14Q16627 93 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 CRTC2Q53ET0 693 aaPredicted RBP12.21□□□□□ -0.45
COL4A6-209ENST00000545689 CMPK2Q5EBM0 449 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 C1orf220Q5T0J3 134 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 ZNF773Q6PK81 442 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 FAM129CQ86XR2 697 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 C15orf40Q8WUR7 153 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 TAMM41Q96BW9 452 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 RTP4Q96DX8 246 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 SPATA9Q9BWV2 254 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 C9IYK1 514 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 CREG1O75629 220 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 EDNRBP24530 442 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 XKR4Q5GH76 650 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 FBXO42Q6P3S6 717 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 AVL9Q8NBF6 648 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 METTL21AQ8WXB1 218 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 SMPDL3AQ92484 453 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 RNF31Q96EP0 1072 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 IMP4Q96G21 291 aaKnown RBP12.21□□□□□ -0.45
COL4A6-209ENST00000545689 MKKSQ9NPJ1 570 aaPredicted RBP12.21□□□□□ -0.45
COL4A6-209ENST00000545689 FABP12A6NFH5 140 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 OAS1P00973 400 aaKnown RBP12.21□□□□□ -0.45
COL4A6-209ENST00000545689 H1F0P07305 194 aaKnown RBP12.21□□□□□ -0.45
COL4A6-209ENST00000545689 ATP5A1P25705 553 aaKnown RBP12.21□□□□□ -0.45
COL4A6-209ENST00000545689 ECHS1P30084 290 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 SUZ12Q15022 739 aaKnown RBP12.21□□□□□ -0.45
COL4A6-209ENST00000545689 OR4F3Q6IEY1 312 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 LRRTM4Q86VH4 590 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 NLGN2Q8NFZ4 835 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 NPLOC4Q8TAT6 608 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 HERVK_113Q902F9 699 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 NCSTNQ92542 709 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 FIZ1Q96SL8 496 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 ABCB9Q9NP78 766 aa12.21□□□□□ -0.45
COL4A6-209ENST00000545689 DNASE1L1P49184 302 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 ATP6AP1Q15904 470 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 FRRS1Q6ZNA5 592 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 TAF8Q7Z7C8 310 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 SYT17Q9BSW7 474 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 TAPBPLQ9BX59 468 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 TXLNGYQ9BZA5 131 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 SLC22A4Q9H015 551 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 ELL3Q9HB65 397 aaPredicted RBP12.21□□□□□ -0.46
COL4A6-209ENST00000545689 MTMR11A4FU01 709 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 UGT1A6P19224 532 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 UGT1A1P22309 533 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 UGT1A4P22310 534 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 ARSIQ5FYB1 569 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 C1orf52Q8N6N3 182 aaKnown RBP12.21□□□□□ -0.46
COL4A6-209ENST00000545689 ZFAND2BQ8WV99 257 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 KCTD7Q96MP8 289 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 IFT27Q9BW83 186 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 POLR2J2Q9GZM3 115 aaKnown RBP12.21□□□□□ -0.46
COL4A6-209ENST00000545689 TXNRD2Q9NNW7 524 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 PFDN2Q9UHV9 154 aa12.21□□□□□ -0.46
COL4A6-209ENST00000545689 NAV1Q8NEY1 1877 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 ACOX3O15254 700 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 PGLSO95336 258 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 MPC1LP0DKB6 136 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 TFPIP10646 304 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 TECRLQ5HYJ1 363 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 ATG9BQ674R7 924 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 SMG8Q8ND04 991 aaKnown RBP12.2□□□□□ -0.46
COL4A6-209ENST00000545689 OR56A1Q8NGH5 318 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 IGKV6D-21A0A0A0MT36 114 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 LOC730098B7Z3J9 87 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 ABCB7O75027 752 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 ADH5P11766 374 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 IGFBP4P22692 258 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 SMSP52788 366 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 NIPAL4Q0D2K0 466 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 SIX1Q15475 284 aaPredicted RBP12.2□□□□□ -0.46
COL4A6-209ENST00000545689 C22orf39Q6P5X5 142 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 SLITRK4Q8IW52 837 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 CELF5Q8N6W0 485 aaKnown RBP12.2□□□□□ -0.46
COL4A6-209ENST00000545689 KLHL6Q8WZ60 621 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 CAPNS2Q96L46 248 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 DAPL1A0PJW8 107 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 RLN1P04808 185 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 POU2F1P14859 743 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 CRHR2Q13324 411 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 PDGFRLQ15198 375 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 TGFBIQ15582 683 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 COQ5Q5HYK3 327 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 FAAH2Q6GMR7 532 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 WDTC1Q8N5D0 677 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 ZMIZ2Q8NF64 920 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 SLC45A3Q96JT2 553 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 TUBA1CQ9BQE3 449 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms