RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 WDR54Q9H977 334 aa20.2■□□□□ 0.82
SCARB1-210ENST00000545493 MAP4K5Q9Y4K4 846 aa20.2■□□□□ 0.82
SCARB1-210ENST00000545493 MAST4O15021 2626 aa20.2■□□□□ 0.82
SCARB1-210ENST00000545493 LOC105369274A0A096LPK9 316 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 IGKV1-8A0A0C4DH67 115 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 LOC102723532A0A0G2JNH3 316 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 CTAGE9A4FU28 777 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 PEX12O00623 359 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 SOCS6O14544 535 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 ALOX12BO75342 701 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 ALBP02768 609 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 OR1D4P47884 311 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 MYBPC3Q14896 1274 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 WASHC2DQ5SRD0 308 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 RNASEH2BQ5TBB1 312 aaKnown RBP20.19■□□□□ 0.82
SCARB1-210ENST00000545493 NEK10Q6ZWH5 1172 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 OVCH1Q7RTY7 1134 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 OR4N4Q8N0Y3 316 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 EFCAB3Q8N7B9 438 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 CD200R1Q8TD46 325 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 PNPLA2Q96AD5 504 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 PKP4Q99569 1192 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 ZFYVE21Q9BQ24 234 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 DPH7Q9BTV6 452 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 KCNF1Q9H3M0 494 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 SOX17Q9H6I2 414 aaPredicted RBP20.19■□□□□ 0.82
SCARB1-210ENST00000545493 ZNF552Q9H707 407 aaPredicted RBP20.19■□□□□ 0.82
SCARB1-210ENST00000545493 FAM114A2Q9NRY5 505 aa20.19■□□□□ 0.82
SCARB1-210ENST00000545493 MAGEB16A2A368 324 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 AGPSO00116 658 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 SRPX2O60687 465 aaPredicted RBP20.18■□□□□ 0.82
SCARB1-210ENST00000545493 CATP04040 527 aaKnown RBP20.18■□□□□ 0.82
SCARB1-210ENST00000545493 MMP11P24347 488 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 CMPK1P30085 196 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 LONRF1Q17RB8 773 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 TTLL9Q3SXZ7 439 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 SHISA6Q6ZSJ9 500 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 FAM26EQ8N5C1 309 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 PPFIBP2Q8ND30 876 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 GRK7Q8WTQ7 553 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 SMPDL3AQ92484 453 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 C20orf96Q9NUD7 363 aaPredicted RBP20.18■□□□□ 0.82
SCARB1-210ENST00000545493 TAC3Q9UHF0 121 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 FBXL4Q9UKA2 621 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 HS3ST3B1Q9Y662 390 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 MAD1L1Q9Y6D9 718 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 MAU2Q9Y6X3 613 aa20.18■□□□□ 0.82
SCARB1-210ENST00000545493 HEATR5BQ9P2D3 2071 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 HYKKA2RU49 373 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 SLC16A8O95907 504 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 IGHEP01854 428 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 GNLYP22749 145 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 PNLIPRP1P54315 467 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 ARHGAP19Q14CB8 494 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 PRTGQ2VWP7 1150 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 PAQR7Q86WK9 346 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 PPIL6Q8IXY8 311 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 FBXO15Q8NCQ5 510 aaPredicted RBP20.17■□□□□ 0.82
SCARB1-210ENST00000545493 GALNT11Q8NCW6 608 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 ZNF480Q8WV37 535 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 GPR21Q99679 349 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 PLCD4Q9BRC7 762 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 MRPS30Q9NP92 439 aaKnown RBP20.17■□□□□ 0.82
SCARB1-210ENST00000545493 C5AR2Q9P296 337 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 STOX2Q9P2F5 926 aaPredicted RBP20.17■□□□□ 0.82
SCARB1-210ENST00000545493 KLHL42Q9P2K6 505 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 CDC23Q9UJX2 597 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 SNX12Q9UMY4 172 aa20.17■□□□□ 0.82
SCARB1-210ENST00000545493 GOLGA6L10A0A0M3HER8 536 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 VSTM2BA6NLU5 285 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 VPS4BO75351 444 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 BANF1O75531 89 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 EIF2S1P05198 315 aaKnown RBP20.16■□□□□ 0.82
SCARB1-210ENST00000545493 MPC1LP0DKB6 136 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 PIM1P11309 404 aaPredicted RBP20.16■□□□□ 0.82
SCARB1-210ENST00000545493 RPA3P35244 121 aaPredicted RBP20.16■□□□□ 0.82
SCARB1-210ENST00000545493 SOX8P57073 446 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 TSTA3Q13630 321 aaPredicted RBP20.16■□□□□ 0.82
SCARB1-210ENST00000545493 CRYMQ14894 314 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 NAA25Q14CX7 972 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 INPP5JQ15735 1006 aaPredicted RBP20.16■□□□□ 0.82
SCARB1-210ENST00000545493 ICE2Q659A1 982 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 ZNF425Q6IV72 752 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 FBXO42Q6P3S6 717 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 PIWIL4Q7Z3Z4 852 aaKnown RBP20.16■□□□□ 0.82
SCARB1-210ENST00000545493 LMNTD2Q8IXW0 634 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 LRRC56Q8IYG6 542 aaPredicted RBP20.16■□□□□ 0.82
SCARB1-210ENST00000545493 CPNE9Q8IYJ1 553 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 INPP5DQ92835 1189 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 MESP1Q9BRJ9 268 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 AARSD1Q9BTE6 412 aaKnown RBP20.16■□□□□ 0.82
SCARB1-210ENST00000545493 CCDC68Q9H2F9 335 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 ZBTB20Q9HC78 741 aaPredicted RBP20.16■□□□□ 0.82
SCARB1-210ENST00000545493 ZC3H7BQ9UGR2 993 aaKnown RBP20.16■□□□□ 0.82
SCARB1-210ENST00000545493 NXT1Q9UKK6 140 aaKnown RBP20.16■□□□□ 0.82
SCARB1-210ENST00000545493 VPS4AQ9UN37 437 aa20.16■□□□□ 0.82
SCARB1-210ENST00000545493 USP9YO00507 2555 aaPredicted RBP20.15■□□□□ 0.82
SCARB1-210ENST00000545493 E7ENX8 843 aa20.15■□□□□ 0.82
SCARB1-210ENST00000545493 H0YGG7 62 aa20.15■□□□□ 0.82
SCARB1-210ENST00000545493 CES2O00748 559 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms