RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 TNFRSF10BO14763 440 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ADAMDEC1O15204 470 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 AQP1P29972 269 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 FMO3P31513 532 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 GKP32189 559 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 RFC2P35250 354 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 BDKRB1P46663 353 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 AP1S2P56377 157 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 CDKL1Q00532 357 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 C2orf80Q0P641 193 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 LSAMPQ13449 338 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ATG9BQ674R7 924 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 BRAT1Q6PJG6 821 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 GALNT13Q8IUC8 556 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 CMTR2Q8IYT2 770 aaKnown RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 C11orf65Q8NCR3 313 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ZNF420Q8TAQ5 688 aaPredicted RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 C12orf43Q96C57 262 aaKnown RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 MAELQ96JY0 434 aaKnown RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 ZNF641Q96N77 438 aaPredicted RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 RDH12Q96NR8 316 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 PHF12Q96QT6 1004 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 CITED4Q96RK1 184 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ZNF347Q96SE7 839 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 WRAP53Q9BUR4 548 aaKnown RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 SPATA5L1Q9BVQ7 753 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 RIOK2Q9BVS4 552 aaKnown RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 OSBPL10Q9BXB5 764 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 KCNH6Q9H252 994 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 RPF2Q9H7B2 306 aaKnown RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 KLHL28Q9NXS3 571 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 VPS29Q9UBQ0 182 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ASF1AQ9Y294 204 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 MAP4K5Q9Y4K4 846 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 LOC110117498-PIK3R3F6TDL0 507 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 IGLV3-25P01717 112 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 C1QAP02745 245 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 S100A6P06703 90 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 GSTM1P09488 218 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ELK4P28324 431 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ERVPABLB-1P60509 514 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 LMAN2Q12907 356 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 CBLBQ13191 982 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 HKDC1Q2TB90 917 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ARSIQ5FYB1 569 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 MANEALQ5VSG8 457 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 NIPAL1Q6NVV3 410 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 DEF8Q6ZN54 512 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 PTCHD4Q6ZW05 846 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 P2RY8Q86VZ1 359 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 CACTIN-AS1Q8N1I8 211 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 KRTCAP2Q8N6L1 136 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 KREMEN2Q8NCW0 462 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 BTN2A2Q8WVV5 523 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 PIK3R3Q92569 461 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 USP7Q93009 1102 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 TMEM125Q96AQ2 219 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 C3orf30Q96M34 536 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ZNF607Q96SK3 696 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 TUBA1CQ9BQE3 449 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 MAGIXQ9H6Y5 334 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 RASSF1Q9NS23 344 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 SMOXQ9NWM0 555 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 FZD4Q9ULV1 537 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 SLC22A14Q9Y267 594 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 PCDHGA11Q9Y5H2 935 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 PCDHGA10Q9Y5H3 936 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 LOC100506127A0A0U1RQW1 187 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 NOTOA8MTQ0 251 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 DHFRP00374 187 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 ARNTP27540 789 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 ARSFP54793 590 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 CSNK2BP67870 215 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 ABATP80404 500 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 RAB39AQ14964 217 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 ZSWIM7Q19AV6 140 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 PDE12Q6L8Q7 609 aaKnown RBP5.63□□□□□ -1.51
VPS50-220ENST00000544910 CFAP206Q8IYR0 622 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 PNPLA1Q8N8W4 532 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 LRRC20Q8TCA0 184 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 NUS1Q96E22 293 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 ZNF597Q96LX8 424 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 BIRC8Q96P09 236 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 DUS2Q9NX74 493 aaKnown RBP5.63□□□□□ -1.51
VPS50-220ENST00000544910 PHF11Q9UIL8 331 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 MAFFQ9ULX9 164 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 LOC285556D6RIA3 1793 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 SIP14410 1827 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 GRXCR2A6NFK2 248 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 PCDH7O60245 1069 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 ABCB7O75027 752 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 TMCC2O75069 709 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 AP2A2O94973 939 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 ARHGEF15O94989 841 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 SNAP29O95721 258 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 SRPRAP08240 638 aaKnown RBP5.63□□□□□ -1.51
VPS50-220ENST00000544910 ALDOCP09972 364 aaKnown RBP5.63□□□□□ -1.51
VPS50-220ENST00000544910 ATXN8OSP0DMR3 200 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 OR4D2P58180 307 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 CYP4F2P78329 520 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms