RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 SLC22A18Q96BI1 424 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 FLRT1Q9NZU1 646 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 KLF15Q9UIH9 416 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 REM1O75628 298 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 UBXN7O94888 489 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 C8orf89P0DMQ9 161 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 SLC7A1P30825 629 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 AGTR2P50052 363 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 ARF5P84085 180 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 DSC3Q14574 896 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 MYBPC3Q14896 1274 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 PCLAFQ15004 111 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 AGTRAPQ6RW13 159 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 LRRC70Q7Z2Q7 622 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 CHST4Q8NCG5 386 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 SCAMP4Q969E2 229 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 RFKQ969G6 155 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 KCNS3Q9BQ31 491 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 SGIP1Q9BQI5 828 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 CREBZFQ9NS37 354 aa12.49□□□□□ -0.41
CHD4-211ENST00000544484 OR1I1O60431 355 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 DIRAS1O95057 198 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 CYP11A1P05108 521 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 SLC18A2Q05940 514 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 NXPE1Q8N323 547 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 OR10G2Q8NGC3 310 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 OR10T2Q8NGX3 314 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 XRN1Q8IZH2 1706 aaKnown RBP12.48□□□□□ -0.41
CHD4-211ENST00000544484 PGLSO95336 258 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 BCHEP06276 602 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 CSF2RAP15509 400 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 DSTNP60981 165 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 MC1RQ01726 317 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 CRB2Q5IJ48 1285 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 SAMD14Q8IZD0 417 aaPredicted RBP12.48□□□□□ -0.41
CHD4-211ENST00000544484 HPS1Q92902 700 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 KCNC2Q96PR1 638 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 IL4I1Q96RQ9 567 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 MED31Q9Y3C7 131 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 MYADML2A6NDP7 307 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 SLC22A2O15244 555 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 ALPPL2P10696 532 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 TGFBIQ15582 683 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 ANKRD26P1Q6NSI1 321 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 TOP1MTQ969P6 601 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 SLC25A36Q96CQ1 311 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 ZNF317Q96PQ6 595 aaPredicted RBP12.48□□□□□ -0.41
CHD4-211ENST00000544484 BTBD1Q9H0C5 482 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 PHF24Q9UPV7 400 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 CLCA3PQ9Y6N3 262 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 MEIS3P2A8K0S8 358 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 MANBAO00462 879 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 MAGEA11P43364 429 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 MEF2AQ02078 507 aaPredicted RBP12.48□□□□□ -0.41
CHD4-211ENST00000544484 SWT1Q5T5J6 900 aaKnown RBP12.48□□□□□ -0.41
CHD4-211ENST00000544484 SMYD5Q6GMV2 418 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 ZC3H3Q8IXZ2 948 aaKnown RBP12.48□□□□□ -0.41
CHD4-211ENST00000544484 IGSF8Q969P0 613 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 IL1RAPQ9NPH3 570 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 UNCXA6NJT0 531 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 KCNA5P22460 613 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 COL9A2Q14055 689 aaPredicted RBP12.48□□□□□ -0.41
CHD4-211ENST00000544484 CRTC2Q53ET0 693 aaPredicted RBP12.48□□□□□ -0.41
CHD4-211ENST00000544484 RAB6CQ53S08 254 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 EGFLAMQ63HQ2 1017 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 SERINC5Q86VE9 423 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 MEIOBQ8N635 442 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 C12orf76Q8N812 135 aaPredicted RBP12.48□□□□□ -0.41
CHD4-211ENST00000544484 ZNF483Q8TF39 744 aaPredicted RBP12.48□□□□□ -0.41
CHD4-211ENST00000544484 RAB6CQ9H0N0 254 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 SPATA7Q9P0W8 599 aa12.48□□□□□ -0.41
CHD4-211ENST00000544484 URB1O60287 2271 aaKnown RBP12.48□□□□□ -0.41
CHD4-211ENST00000544484 PSMD9O00233 223 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 CHRNA1P02708 482 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 IFNA6P05013 189 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 HSD17B2P37059 387 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 DNASE1L1P49184 302 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 RPS13P62277 151 aaKnown RBP12.47□□□□□ -0.41
CHD4-211ENST00000544484 RABL3Q5HYI8 236 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 ZNF776Q68DI1 518 aaPredicted RBP12.47□□□□□ -0.41
CHD4-211ENST00000544484 KIAA1161Q6NSJ0 714 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 TTLQ8NG68 377 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 ASB9Q96DX5 294 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 MOCOSQ96EN8 888 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 UTS2RQ9UKP6 389 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 LCHNA4D1U4 455 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 MPZL2O60487 215 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 DBIP07108 87 aaKnown RBP12.47□□□□□ -0.41
CHD4-211ENST00000544484 ZNF30P17039 623 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 CCKBRP32239 447 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 GSK3BP49841 420 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 EEFSECP57772 596 aaKnown RBP12.47□□□□□ -0.41
CHD4-211ENST00000544484 TOR1AIP1Q5JTV8 583 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 SPANXN4Q5MJ08 99 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 C1orf220Q5T0J3 134 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 SMPDL3AQ92484 453 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 ZNF347Q96SE7 839 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 DERL2Q9GZP9 239 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 ADAMTS10Q9H324 1103 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 MALT1Q9UDY8 824 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms