RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 KCTD19Q17RG1 926 aaPredicted RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 CCNYL2Q5T2Q4 361 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 ATPAF1Q5TC12 328 aaPredicted RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 PGAP1Q75T13 922 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 MARVELD2Q8N4S9 558 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 PLA2G15Q8NCC3 412 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 UFD1Q92890 307 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 IGSF21Q96ID5 467 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 MYL10Q9BUA6 226 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 SPATA9Q9BWV2 254 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 DNTTIP1Q9H147 329 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 NT5MQ9NPB1 228 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 KCNK7Q9Y2U2 307 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 A0A0X1KG70 313 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 LEUTXA8MZ59 168 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 RGS10O43665 173 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 GPR37L1O60883 481 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 BCL10O95999 233 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 GSNP06396 782 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 BGNP21810 368 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 BUD31P41223 144 aaPredicted RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 RAD23AP54725 363 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 WDR4P57081 412 aaKnown RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 MMRN1Q13201 1228 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 SLC15A2Q16348 729 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 MAN2A1Q16706 1144 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 KIAA1755Q5JYT7 1200 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 OR5M10Q6IEU7 315 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 SYCE2Q6PIF2 218 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 LRFN4Q6PJG9 635 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 PET117Q6UWS5 81 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 FUNDC1Q8IVP5 155 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 BOD1L2Q8IYS8 172 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 SVOPQ8N4V2 548 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 L3MBTL4Q8NA19 623 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 AGBL5Q8NDL9 886 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 CMASQ8NFW8 434 aaPredicted RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 ART4Q93070 314 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 SGF29Q96ES7 293 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 KIF12Q96FN5 646 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 HMCESQ96FZ2 354 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 C7orf34Q96L11 122 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 CAMKK2Q96RR4 588 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 RMND5AQ9H871 391 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 SIRT7Q9NRC8 400 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 RAB20Q9NX57 234 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 PLK2Q9NYY3 685 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 UBP1Q9NZI7 540 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 PPP4R1LQ9P1A2 415 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 C5AR2Q9P296 337 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 CHRNA9Q9UGM1 479 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 GPN3Q9UHW5 284 aaPredicted RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 DYRK1BQ9Y463 629 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 TAF1LQ8IZX4 1826 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 COL5A3P25940 1745 aaPredicted RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 AQP12BA6NM10 295 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 ACOT7O00154 380 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 GPR182O15218 404 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 LDOC1O95751 146 aaPredicted RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 OTCP00480 354 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 TXNP10599 105 aaKnown RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 ACPPP15309 386 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 CDK9P50750 372 aaKnown RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 GTF2IP78347 998 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 GAD2Q05329 585 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 EGR3Q06889 387 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 EPS8Q12929 822 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 ARL6IP4Q66PJ3 421 aaKnown RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 RAP1GAP2Q684P5 730 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 EIF3MQ7L2H7 374 aaKnown RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 ZNF438Q7Z4V0 828 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 SYT14Q8NB59 555 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 MINDY3Q9H8M7 445 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 ARMT1Q9H993 441 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 ERVK-5Q9HDB9 667 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 DUSP22Q9NRW4 184 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 SPHK1Q9NYA1 384 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 ZNF70Q9UC06 446 aaPredicted RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 ACOT9Q9Y305 439 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 MRPS2Q9Y399 296 aaKnown RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 ARNTLO00327 626 aa8.67□□□□□ -1.02
VPS13D-212ENST00000543766 FLRT2O43155 660 aa8.67□□□□□ -1.02
VPS13D-212ENST00000543766 RNF13O43567 381 aa8.67□□□□□ -1.02
VPS13D-212ENST00000543766 EDF1O60869 148 aaKnown RBP8.67□□□□□ -1.02
VPS13D-212ENST00000543766 RBMXL2O75526 392 aaKnown RBP8.67□□□□□ -1.02
VPS13D-212ENST00000543766 COX4I1P13073 169 aa8.67□□□□□ -1.02
VPS13D-212ENST00000543766 CEBPDP49716 269 aaPredicted RBP8.67□□□□□ -1.02
VPS13D-212ENST00000543766 COMPP49747 757 aaPredicted RBP8.67□□□□□ -1.02
VPS13D-212ENST00000543766 STK19P49842 368 aaPredicted RBP8.67□□□□□ -1.02
VPS13D-212ENST00000543766 SLC13A2Q13183 592 aa8.67□□□□□ -1.02
VPS13D-212ENST00000543766 TRA2AQ13595 282 aaKnown RBP eCLIP8.67□□□□□ -1.02
VPS13D-212ENST00000543766 DRAP1Q14919 205 aaPredicted RBP8.67□□□□□ -1.02
VPS13D-212ENST00000543766 GRK1Q15835 563 aa8.67□□□□□ -1.02
VPS13D-212ENST00000543766 VPS26BQ4G0F5 336 aa8.67□□□□□ -1.02
VPS13D-212ENST00000543766 ARHGAP17Q68EM7 881 aa8.67□□□□□ -1.02
VPS13D-212ENST00000543766 DPPA4Q7L190 304 aa8.67□□□□□ -1.02
VPS13D-212ENST00000543766 CLNKQ7Z7G1 428 aa8.67□□□□□ -1.02
VPS13D-212ENST00000543766 CPOQ8IVL8 374 aa8.67□□□□□ -1.02
VPS13D-212ENST00000543766 TMEM132CQ8N3T6 1108 aa8.67□□□□□ -1.02
VPS13D-212ENST00000543766 OR2C3Q8N628 320 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms