RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 PXYLP1Q8TE99 480 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 PIH1D2Q8WWB5 315 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 EID2BQ96D98 161 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 LGALS12Q96DT0 336 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 ITPAQ9BY32 194 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 KRT84Q9NSB2 600 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 ABCG2Q9UNQ0 655 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 NOD1Q9Y239 953 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 DLGAP4Q9Y2H0 992 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 MN1Q10571 1320 aaPredicted RBP13.35□□□□□ -0.27
VPS33A-208ENST00000543633 KCNE1BA0A087WTH5 132 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.35□□□□□ -0.27
VPS33A-208ENST00000543633 ARVCFO00192 962 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 STC2O76061 302 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 ASGR1P07306 291 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 MYCLP1P12525 358 aaPredicted RBP13.35□□□□□ -0.27
VPS33A-208ENST00000543633 GPX2P18283 190 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 SDC1P18827 310 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 CORO1AP31146 461 aaKnown RBP13.35□□□□□ -0.27
VPS33A-208ENST00000543633 HOXA9P31269 272 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 MAPK8P45983 427 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 RHOAP61586 193 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 VBP1P61758 197 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 SRSF11Q05519 484 aaKnown RBP13.35□□□□□ -0.27
VPS33A-208ENST00000543633 GTF2H3Q13889 308 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 VEZF1Q14119 521 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 TBCEQ15813 527 aaPredicted RBP13.35□□□□□ -0.27
VPS33A-208ENST00000543633 DUOXA1Q1HG43 343 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 FAM151BQ6UXP7 276 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 GALNT5Q7Z7M9 940 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 ARMC8Q8IUR7 673 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 ZZZ3Q8IYH5 903 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 C10orf111Q8N326 155 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 L3MBTL4Q8NA19 623 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 ZNF296Q8WUU4 475 aaPredicted RBP13.35□□□□□ -0.27
VPS33A-208ENST00000543633 LINC01599Q8WXQ3 324 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 STARD8Q92502 1023 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 EPYCQ99645 322 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 HEPHQ9BQS7 1158 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 ASB8Q9H765 288 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 AASDHPPTQ9NRN7 309 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 PLCXD1Q9NUJ7 323 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 SAGE1Q9NXZ1 904 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 KIAA1522Q9P206 1035 aaPredicted RBP13.35□□□□□ -0.27
VPS33A-208ENST00000543633 KIF17Q9P2E2 1029 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 PCDHB9Q9Y5E1 797 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 TOR1BO14657 336 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 GPR39O43194 453 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 ZNF682O95780 498 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 FADS2O95864 444 aaKnown RBP13.34□□□□□ -0.27
VPS33A-208ENST00000543633 PDYNP01213 254 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 CTPS1P17812 591 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 ATF6P18850 670 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 PRPS1L1P21108 318 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 HOXD12P35452 270 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 KRT20P35900 424 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 GDF5P43026 501 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 KIR3DL1P43629 444 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 SGSHP51688 502 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 ARPP19P56211 112 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 PPP1R8Q12972 351 aaKnown RBP13.34□□□□□ -0.27
VPS33A-208ENST00000543633 SIM2Q14190 667 aaPredicted RBP13.34□□□□□ -0.27
VPS33A-208ENST00000543633 LAIR1Q6GTX8 287 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 NEK5Q6P3R8 708 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 DOK6Q6PKX4 331 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 ANKS3Q6ZW76 656 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 CLHC1Q8NHS4 586 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 SELENOMQ8WWX9 145 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 ZHX1-C8orf76Q96EF9 292 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 INPP5KQ9BT40 448 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 REEP1Q9H902 201 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 ZFYVE1Q9HBF4 777 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 FAM120CQ9NX05 1096 aaKnown RBP13.34□□□□□ -0.27
VPS33A-208ENST00000543633 TMEM161AQ9NX61 479 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 STOML2Q9UJZ1 356 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 PPT2Q9UMR5 302 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 KIAA1671Q9BY89 1806 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 AGAP14A8MT82 685 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 EFCAB9A8MZ26 197 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 FKTNO75072 461 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 SOCS5O75159 536 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 UPK1BO75841 260 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 EPN2O95208 641 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 C9P02748 559 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 CD36P16671 472 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 SERPINB1P30740 379 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 KDELR2P33947 212 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 CSNK1DP48730 415 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 NCS1P62166 190 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 ELP6Q0PNE2 266 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 SGO1Q5FBB7 561 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 CCDC81Q6ZN84 652 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 MCFD2Q8NI22 146 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 METTL2AQ96IZ6 378 aaKnown RBP13.34□□□□□ -0.27
VPS33A-208ENST00000543633 TXNDC15Q96J42 360 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 HRASLS5Q96KN8 279 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 BOCQ9BWV1 1114 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 GPR62Q9BZJ7 368 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 ELOVL6Q9H5J4 265 aa13.34□□□□□ -0.27
VPS33A-208ENST00000543633 ELAC1Q9H777 363 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms