RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 CASC4Q6P4E1 433 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 WDR73Q6P4I2 378 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 FBXO38Q6PIJ6 1188 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ENPP7Q6UWV6 458 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 FAM151BQ6UXP7 276 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 KDM7AQ6ZMT4 941 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ZNF574Q6ZN55 896 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 H1FNTQ75WM6 255 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 TMPRSS7Q7RTY8 843 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 PIWIL3Q7Z3Z3 882 aaKnown RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 PXKQ7Z7A4 578 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 LYSMD2Q8IV50 215 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 PELI3Q8N2H9 469 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 MMGT1Q8N4V1 131 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 OR13C4Q8NGS5 318 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 OR2I1PQ8NGU4 316 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 THAP4Q8WY91 577 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 FUBP1Q96AE4 644 aaKnown RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 LRRC46Q96FV0 321 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 TCTN2Q96GX1 697 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 SERPINB12Q96P63 405 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 RANBP9Q96S59 729 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 AGAP2Q99490 1192 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 C19orf43Q9BQ61 176 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 LRRC1Q9BTT6 524 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 EDEM2Q9BV94 578 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 CARD6Q9BX69 1037 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 TEX101Q9BY14 249 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 FRMD8Q9BZ67 464 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 DPH5Q9H2P9 285 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 GAREM1Q9H706 876 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ERVMER34-1Q9H9K5 563 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 PARD6AQ9NPB6 346 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 IL26Q9NPH9 171 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 NLE1Q9NVX2 485 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 KLQ9UEF7 1012 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 MOSPD1Q9UJG1 213 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 APPL1Q9UKG1 709 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 SNX24Q9Y343 169 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 PSAT1Q9Y617 370 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 FAM208BQ5VWN6 2430 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 TRPM6Q9BX84 2022 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 CEP192Q8TEP8 1941 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 SPTY2D1-AS1A0A0U1RR47 76 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 LNP1A1A4G5 178 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 PRSS38A1L453 326 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 MAGEB16A2A368 324 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 MROH6A6NGR9 719 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 FADS2P1A8MWK0 482 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 ISM1B1AKI9 464 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 FAM47E-STBD1D6RA91 191 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 GSTA4O15217 222 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 YKT6O15498 198 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 SRP72O76094 671 aaKnown RBP5□□□□□ -1.61
CLIP1-217ENST00000543205 SEC31AO94979 1220 aaKnown RBP5□□□□□ -1.61
CLIP1-217ENST00000543205 SLC25A14O95258 325 aaPredicted RBP5□□□□□ -1.61
CLIP1-217ENST00000543205 PLATP00750 562 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 TGM1P22735 817 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 IVDP26440 423 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 RPL21P46778 160 aaKnown RBP5□□□□□ -1.61
CLIP1-217ENST00000543205 LGALS4P56470 323 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 SRP54P61011 504 aaKnown RBP5□□□□□ -1.61
CLIP1-217ENST00000543205 CRADDP78560 199 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 BNC1Q01954 994 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 SLC14A1Q13336 389 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 FZD2Q14332 565 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 NFE2L1Q14494 772 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 CHRNA6Q15825 494 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 ADIPOQQ15848 244 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 GLE1Q53GS7 698 aaKnown RBP5□□□□□ -1.61
CLIP1-217ENST00000543205 ZRANB3Q5FWF4 1079 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 PRAMEF14Q5SWL7 426 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 TSTD2Q5T7W7 516 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 DUPD1Q68J44 220 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 DOK6Q6PKX4 331 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 CRTC3Q6UUV7 619 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 MACC1Q6ZN28 852 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 ZNF534Q76KX8 674 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 TAS2R42Q7RTR8 314 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 RD3Q7Z3Z2 195 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 CAND1Q86VP6 1230 aaKnown RBP5□□□□□ -1.61
CLIP1-217ENST00000543205 PARGQ86W56 976 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 KIAA2013Q8IYS2 634 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 PDIK1LQ8N165 341 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 SLC22A18ASQ8N1D0 253 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 MINDY1Q8N5J2 469 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 ZNF655Q8N720 491 aaPredicted RBP5□□□□□ -1.61
CLIP1-217ENST00000543205 OR56A4Q8NGH8 313 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 GDAP1Q8TB36 358 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 ZNF398Q8TD17 642 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 DTX3LQ8TDB6 740 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 PTP4A1Q93096 173 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 ULK4Q96C45 1275 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 NEIL1Q96FI4 390 aaPredicted RBP5□□□□□ -1.61
CLIP1-217ENST00000543205 DNAJC1Q96KC8 554 aaKnown RBP5□□□□□ -1.61
CLIP1-217ENST00000543205 CABS1Q96KC9 395 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 WDR92Q96MX6 357 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 HGH1Q9BTY7 390 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 TMEM9BQ9NQ34 198 aa5□□□□□ -1.61
CLIP1-217ENST00000543205 CHRAC1Q9NRG0 131 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms