RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 SPATA7Q9P0W8 599 aa16.63■□□□□ 0.25
PPP1CA-210ENST00000542876 C3orf18Q9UK00 162 aa16.63■□□□□ 0.25
PPP1CA-210ENST00000542876 CDC14AQ9UNH5 594 aa16.63■□□□□ 0.25
PPP1CA-210ENST00000542876 KLK4Q9Y5K2 254 aa16.63■□□□□ 0.25
PPP1CA-210ENST00000542876 POLEQ07864 2286 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 A0A0U1RQJ8 604 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 PRPF4O43172 522 aaKnown RBP eCLIP16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 USP1O94782 785 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 ZGLP1P0C6A0 271 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 FBLP22087 321 aaKnown RBP16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 CXCR2P25025 360 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 NPY2RP49146 381 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 ARG2P78540 354 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 CRADDP78560 199 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 BASP1P80723 227 aaKnown RBP16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 MFAP5Q13361 173 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 CCSMST1Q4G0I0 132 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 RNF44Q7L0R7 432 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 GSTA5Q7RTV2 222 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 KBTBD2Q8IY47 623 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 OR2A1Q8NGT9 310 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 CABS1Q96KC9 395 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 ZFYVE21Q9BQ24 234 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 ACAT2Q9BWD1 397 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 YIPF2Q9BWQ6 316 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 TSGA10Q9BZW7 698 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 TREX1Q9NSU2 369 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 RUVBL2Q9Y230 463 aaKnown RBP16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 CCDC88CQ9P219 2028 aa16.62■□□□□ 0.25
PPP1CA-210ENST00000542876 ITPR2Q14571 2701 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 LOC105369274A0A096LPK9 316 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 NSG1A0A0A6YYJ2 146 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 LOC102723532A0A0G2JNH3 316 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 DYTNA2CJ06 578 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 H3BMM5 538 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 PHF2O75151 1096 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 ZSCAN5DPP0CG00 497 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 FDXRP22570 491 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 RPL22P35268 128 aaKnown RBP16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 ANKRD20A4Q4UJ75 823 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 RNF187Q5TA31 235 aaPredicted RBP16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 NDUFAF7Q7L592 441 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 TMEM139Q8IV31 216 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 OR4N4Q8N0Y3 316 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 SLC34A3Q8N130 599 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 DTWD1Q8N5C7 304 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 BCORP1Q8N888 145 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 MAGEB10Q96LZ2 347 aaPredicted RBP16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 DPH7Q9BTV6 452 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 UTP6Q9NYH9 597 aaKnown RBP16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 TSR3Q9UJK0 312 aaKnown RBP16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 GUCA1BQ9UMX6 200 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 DRG1Q9Y295 367 aaKnown RBP16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 ANKRD12Q6UB98 2062 aa16.61■□□□□ 0.25
PPP1CA-210ENST00000542876 SNRNP200O75643 2136 aaKnown RBP16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 KRT87PA6NCN2 255 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 E2F3O00716 465 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 VAPBO95292 243 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 CHRM3P20309 590 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 NMBRP28336 390 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 ATP5DP30049 168 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 FMO4P31512 558 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 RPA3P35244 121 aaPredicted RBP16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 Q0VFX4 171 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 TSTA3Q13630 321 aaPredicted RBP16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 RPS6KA1Q15418 735 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 CCNG2Q16589 344 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 VWA2Q5GFL6 755 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 OR1N1Q8NGS0 311 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 OR9A1PQ8NGU1 263 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 SMPDL3AQ92484 453 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 C8orf44Q96CB5 159 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 TCF12Q99081 682 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 RBSNQ9H1K0 784 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 MRPS30Q9NP92 439 aaKnown RBP16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 FAM114A2Q9NRY5 505 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 OLAHQ9NV23 265 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 TRPC4Q9UBN4 977 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 CNTRLQ7Z7A1 2325 aa16.6■□□□□ 0.25
PPP1CA-210ENST00000542876 A0A1B0GUH1 482 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 A0A1W2PPV9 198 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 OR2A25A4D2G3 310 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 ZNF839A8K0R7 811 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 E5RI56 91 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 KLHL18O94889 574 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 ESR1P03372 595 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 ANXA5P08758 320 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 EMP2P54851 167 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 EMP3P54852 163 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 FASTKQ14296 549 aaKnown RBP16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 CTSL3PQ5NE16 218 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 ATG9BQ674R7 924 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 RPUSD3Q6P087 351 aaKnown RBP16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 CATSPER1Q8NEC5 780 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 RERGQ96A58 199 aaPredicted RBP16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 FAM136AQ96C01 138 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 MVB12AQ96EY5 273 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 BIRC8Q96P09 236 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 C14orf105Q9NVL8 296 aa16.59■□□□□ 0.25
PPP1CA-210ENST00000542876 PTGFRNQ9P2B2 879 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms