RNA–Protein interactions for RNA: ENST00000541959.5

ARF3-208, Transcript of ADP ribosylation factor 3, human

APPRIS P1 TSL 5 BASIC

Gene ARF3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF3-208	ENST00000541959	LIF	P15018	202 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	YBX1	P67809	324 aa	Known RBP	18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	TAP2	Q03519	686 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	ABHD18	Q0P651	414 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	TAF1B	Q53T94	588 aa	Predicted RBP	18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	FCRL6	Q6DN72	434 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	RAPH1	Q70E73	1250 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	FRA10AC1	Q70Z53	315 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	ADCK2	Q7Z695	626 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	DNAJC22	Q8N4W6	341 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	ZSCAN1	Q8NBB4	408 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	TTC9	Q92623	222 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	MCMBP	Q9BTE3	642 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	SPRTN	Q9H040	489 aa	Predicted RBP	18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	ATG10	Q9H0Y0	220 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	ACTR5	Q9H9F9	607 aa	Predicted RBP	18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	L2HGDH	Q9H9P8	463 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	POPDC3	Q9HBV1	291 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	CCDC177	Q9NQR7	707 aa	Predicted RBP	18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	CTNNAL1	Q9UBT7	734 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	IKZF3	Q9UKT9	509 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	CDC7	O00311	574 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	STAT5A	P42229	794 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	TBPL1	P62380	186 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	NAE1	Q13564	534 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	BMPR2	Q13873	1038 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	MAP7	Q14244	749 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	ZC3H12B	Q5HYM0	836 aa	Known RBP	18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	ICE2	Q659A1	982 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	AGTRAP	Q6RW13	159 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	MCAT	Q8IVS2	390 aa	Known RBP	18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	SPATA6L	Q8N4H0	392 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	ANKRD49	Q8WVL7	239 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	MR1	Q95460	341 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	ZUFSP	Q96AP4	578 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	WBP1	Q96G27	269 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	DPH7	Q9BTV6	452 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	SLC6A20	Q9NP91	592 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	EURL	Q9NYK6	297 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	PADI1	Q9ULC6	663 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	CFAP46	Q8IYW2	2715 aa		18.86	■□□□□ 0.61
ARF3-208	ENST00000541959	BAHCC1	Q9P281	2608 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959		A0A0J9YVX5	310 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	ZNF749	O43361	778 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	KATNA1	O75449	491 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	PRB1	P04280	392 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	CTSB	P07858	339 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	MSL3P1	P0C860	447 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	CCDC166	P0CW27	439 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	WT1	P19544	449 aa	Predicted RBP	18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	DLST	P36957	453 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	RAB10	P61026	200 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	NAA25	Q14CX7	972 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	PRAMEF13	Q5VWM6	474 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	FAM199X	Q6PEV8	388 aa	Predicted RBP	18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	CMC1	Q7Z7K0	106 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	RELL1	Q8IUW5	271 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	GSPT2	Q8IYD1	628 aa	Known RBP	18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	ZNF655	Q8N720	491 aa	Predicted RBP	18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	PDLIM5	Q96HC4	596 aa	Known RBP	18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	EGFL8	Q99944	293 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	ACSS3	Q9H6R3	686 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	LHX9	Q9NQ69	397 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	CROT	Q9UKG9	612 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	PCDHB3	Q9Y5E6	796 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	PCDHGA4	Q9Y5G9	962 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	IKBKG	Q9Y6K9	419 aa		18.85	■□□□□ 0.61
ARF3-208	ENST00000541959	ESPN	B1AK53	854 aa		18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	TARM1	B6A8C7	271 aa		18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	ZNF500	O60304	480 aa	Predicted RBP	18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	NRP2	O60462	931 aa		18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	KLK3	P07288	261 aa	Predicted RBP	18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	ENO2	P09104	434 aa	Predicted RBP	18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	TCN2	P20062	427 aa		18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	GABRA4	P48169	554 aa		18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	AP1S2	P56377	157 aa		18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	VSX2	P58304	361 aa	Predicted RBP	18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	GPS2	Q13227	327 aa		18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	CSHL1	Q14406	222 aa		18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	TSN	Q15631	228 aa	Known RBP	18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	MROH9	Q5TGP6	573 aa		18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	CT55	Q8WUE5	264 aa		18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	SELENOS	Q9BQE4	189 aa		18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	EFHD1	Q9BUP0	239 aa		18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	CHRNA10	Q9GZZ6	450 aa		18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	TXLNG	Q9NUQ3	528 aa		18.84	■□□□□ 0.61
ARF3-208	ENST00000541959	POC1B-GALNT4	F8VUJ3	575 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	ZSCAN9	O15535	394 aa	Predicted RBP	18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	CTSV	O60911	334 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	EIF2S1	P05198	315 aa	Known RBP	18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	INHBA	P08476	426 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	HBQ1	P09105	142 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	ABAT	P80404	500 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	PRDX1	Q06830	199 aa	Known RBP	18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	PTCHD3	Q3KNS1	767 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	C1orf189	Q5VU69	101 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	CAPN13	Q6MZZ7	669 aa	Predicted RBP	18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	SBSN	Q6UWP8	590 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	ADAMTSL2	Q86TH1	951 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	LRRC56	Q8IYG6	542 aa	Predicted RBP	18.83	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms