RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 SLC47A1Q96FL8 570 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 SERPINB11Q96P15 392 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 C19orf43Q9BQ61 176 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 APOL2Q9BQE5 337 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 FAM83CQ9BQN1 747 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 CCDC32Q9BV29 185 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 SPATA9Q9BWV2 254 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 TOR3AQ9H497 397 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 DUSP21Q9H596 190 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 IL1RL2Q9HB29 575 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 ZDHHC4Q9NPG8 344 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 SLC52A3Q9NQ40 469 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 TDP1Q9NUW8 608 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 ASIC5Q9NY37 505 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 CCDC59Q9P031 241 aaKnown RBP10.14□□□□□ -0.79
CHFR-219ENST00000541341 COX16Q9P0S2 106 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 KIAA1522Q9P206 1035 aaPredicted RBP10.14□□□□□ -0.79
CHFR-219ENST00000541341 CRNNQ9UBG3 495 aaPredicted RBP10.14□□□□□ -0.79
CHFR-219ENST00000541341 ZMYM5Q9UJ78 669 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 RPS6KA6Q9UK32 745 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 MFHAS1Q9Y4C4 1052 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 PI4KAP42356 2102 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 TPRP12270 2363 aaKnown RBP10.13□□□□□ -0.79
CHFR-219ENST00000541341 A0A1B0GTW7 788 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 C2orf78A6NCI8 922 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 YJEFN3A6XGL0 299 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 J3QRK9 145 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 PRMT5O14744 637 aaPredicted RBP10.13□□□□□ -0.79
CHFR-219ENST00000541341 BCKDKO14874 412 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 SNPHO15079 494 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 MSI1O43347 362 aaKnown RBP10.13□□□□□ -0.79
CHFR-219ENST00000541341 RGS14O43566 566 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 DFNA5O60443 496 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 UPK1BO75841 260 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 EPN2O95208 641 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 ANGPTL1O95841 491 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 OLFM2O95897 454 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 FYNP06241 537 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 CKMP06732 381 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 USP17L7P0C7H9 530 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 NCF1P14598 390 aaPredicted RBP10.13□□□□□ -0.79
CHFR-219ENST00000541341 ZNF37AP17032 561 aaPredicted RBP10.13□□□□□ -0.79
CHFR-219ENST00000541341 RHOQP17081 205 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 SPINK2P20155 84 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 NFKBIAP25963 317 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 ARNTP27540 789 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 MAPK1P28482 360 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 WEE1P30291 646 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 GJA4P35212 333 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 GMPRP36959 345 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 MPLP40238 635 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 ABCG1P45844 678 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 TRPC1P48995 793 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 ALDH9A1P49189 494 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 DGKEP52429 567 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 MLLT6P55198 1093 aaPredicted RBP10.13□□□□□ -0.79
CHFR-219ENST00000541341 YBEYP58557 167 aaPredicted RBP10.13□□□□□ -0.79
CHFR-219ENST00000541341 ARPC4P59998 168 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 CTBSQ01459 385 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 ELP6Q0PNE2 266 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 TAF10Q12962 218 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 CTF1Q16619 201 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 ZNF404Q494X3 552 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 OTUD3Q5T2D3 398 aaPredicted RBP10.13□□□□□ -0.79
CHFR-219ENST00000541341 CLEC6AQ6EIG7 209 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 PSAPL1Q6NUJ1 521 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 SHQ1Q6PI26 577 aaKnown RBP10.13□□□□□ -0.79
CHFR-219ENST00000541341 KDELC1Q6UW63 502 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 ISLR2Q6UXK2 745 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 GPRIN3Q6ZVF9 776 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 SCD5Q86SK9 330 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 IFNEQ86WN2 208 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 HEATR4Q86WZ0 1026 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 KRT73Q86Y46 540 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 NPWQ8N729 165 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 ARL14EPQ8N8R7 260 aaPredicted RBP10.13□□□□□ -0.79
CHFR-219ENST00000541341 C9orf43Q8TAL5 461 aaPredicted RBP10.13□□□□□ -0.79
CHFR-219ENST00000541341 BRSK1Q8TDC3 778 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 LRRN4Q8WUT4 740 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 MRPS31Q92665 395 aaKnown RBP10.13□□□□□ -0.79
CHFR-219ENST00000541341 PROX1Q92786 737 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 TANKQ92844 425 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 FBXO32Q969P5 355 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 TP53INP1Q96A56 240 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 FBXL8Q96CD0 374 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 TMCO6Q96DC7 493 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 ERLEC1Q96DZ1 483 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 ZHX1-C8orf76Q96EF9 292 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 CRELD1Q96HD1 420 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 MRGPRX2Q96LB1 330 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 PHF12Q96QT6 1004 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 ATOH8Q96SQ7 321 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 SEPHS2Q99611 448 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 P2RY13Q9BPV8 354 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 AARSD1Q9BTE6 412 aaKnown RBP10.13□□□□□ -0.79
CHFR-219ENST00000541341 ACTR8Q9H981 624 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 CCDC177Q9NQR7 707 aaPredicted RBP10.13□□□□□ -0.79
CHFR-219ENST00000541341 TLR8Q9NR97 1041 aaKnown RBP10.13□□□□□ -0.79
CHFR-219ENST00000541341 CATSPERZQ9NTU4 200 aa10.13□□□□□ -0.79
CHFR-219ENST00000541341 OBP2AQ9NY56 170 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms