RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 ACAT2Q9BWD1 397 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 SGPP1Q9BX95 441 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 C1QTNF3Q9BXJ4 246 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 SHCBP1LQ9BZQ2 653 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 C20orf27Q9GZN8 174 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 TWSG1Q9GZX9 223 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 ALG2Q9H553 416 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 SLC32A1Q9H598 525 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 STN1Q9H668 368 aaKnown RBP9.02□□□□□ -0.97
DDX55-208ENST00000541259 MANSC1Q9H8J5 431 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 UCK1Q9HA47 277 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 ZBTB26Q9HCK0 441 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 SEMA4BQ9NPR2 832 aaPredicted RBP9.02□□□□□ -0.97
DDX55-208ENST00000541259 HRASLS2Q9NWW9 162 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 OPTCQ9UBM4 332 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 GVINP1Q7Z2Y8 2422 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 COL27A1Q8IZC6 1860 aaPredicted RBP9.02□□□□□ -0.97
DDX55-208ENST00000541259 IGHV1OR21-1A0A087WYE8 117 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 GSAPA4D1B5 854 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 EME2A4GXA9 379 aaPredicted RBP9.01□□□□□ -0.97
DDX55-208ENST00000541259 OR5K3A6NET4 321 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 LILRA5A6NI73 299 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 ISM1B1AKI9 464 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 UBFD1O14562 309 aaKnown RBP9.01□□□□□ -0.97
DDX55-208ENST00000541259 OR7A17O14581 309 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 FLRT2O43155 660 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 CBFA2T3O75081 653 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 UBXN7O94888 489 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 PROS1P07225 676 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 CHRNGP07510 517 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 CKMT1AP12532 417 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 AMD1P17707 334 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 PRDX3P30048 256 aaKnown RBP9.01□□□□□ -0.97
DDX55-208ENST00000541259 MDH1P40925 334 aaKnown RBP9.01□□□□□ -0.97
DDX55-208ENST00000541259 DAB2P98082 770 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 CFHR1Q03591 330 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 CLCQ05315 142 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 BST1Q10588 318 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 SLC14A1Q13336 389 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 GTF2H2Q13888 395 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 NR1D2Q14995 579 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 PDK4Q16654 411 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 AMZ1Q400G9 498 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 CFAP157Q5JU67 520 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 THEMIS2Q5TEJ8 643 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 STPG1Q5TH74 334 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 PRAMEF13Q5VWM6 474 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 CAPN13Q6MZZ7 669 aaPredicted RBP9.01□□□□□ -0.97
DDX55-208ENST00000541259 GTF2H2CQ6P1K8 395 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 FRMD7Q6ZUT3 714 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 TRIM73Q86UV7 250 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 NAXDQ8IW45 347 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 RAB42Q8N4Z0 105 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 AVL9Q8NBF6 648 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 OR2A1Q8NGT9 310 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 PPP1R14CQ8TAE6 165 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 TRPC4APQ8TEL6 797 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 PRR11Q96HE9 360 aaPredicted RBP9.01□□□□□ -0.97
DDX55-208ENST00000541259 PPM1MQ96MI6 270 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 OR2A14Q96R47 310 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 MIPEPQ99797 713 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 RAB11FIP5Q9BXF6 653 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.01□□□□□ -0.97
DDX55-208ENST00000541259 ABCG4Q9H172 646 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 NOL11Q9H8H0 719 aaKnown RBP9.01□□□□□ -0.97
DDX55-208ENST00000541259 IPPKQ9H8X2 491 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 TNFRSF12AQ9NP84 129 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 CCDC177Q9NQR7 707 aaPredicted RBP9.01□□□□□ -0.97
DDX55-208ENST00000541259 DNAJC11Q9NVH1 559 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 KCNK4Q9NYG8 393 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 ACTR10Q9NZ32 417 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 OR6C2Q9NZP2 312 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 TAC3Q9UHF0 121 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 ZNF225Q9UK10 706 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 KLHL20Q9Y2M5 609 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 TNPO3Q9Y5L0 923 aaKnown RBP9.01□□□□□ -0.97
DDX55-208ENST00000541259 SPEGQ15772 3267 aa9.01□□□□□ -0.97
DDX55-208ENST00000541259 SCN3AQ9NY46 2000 aa9□□□□□ -0.97
DDX55-208ENST00000541259 ADAMTS20P59510 1910 aa9□□□□□ -0.97
DDX55-208ENST00000541259 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9□□□□□ -0.97
DDX55-208ENST00000541259 PIPSLA2A3N6 862 aa9□□□□□ -0.97
DDX55-208ENST00000541259 ZNF839A8K0R7 811 aa9□□□□□ -0.97
DDX55-208ENST00000541259 E7EQ34 232 aa9□□□□□ -0.97
DDX55-208ENST00000541259 KDM1AO60341 852 aa9□□□□□ -0.97
DDX55-208ENST00000541259 NPHS1O60500 1241 aa9□□□□□ -0.97
DDX55-208ENST00000541259 KATNA1O75449 491 aa9□□□□□ -0.97
DDX55-208ENST00000541259 SERPINE1P05121 402 aa9□□□□□ -0.97
DDX55-208ENST00000541259 CDH1P12830 882 aa9□□□□□ -0.97
DDX55-208ENST00000541259 EPB42P16452 691 aa9□□□□□ -0.97
DDX55-208ENST00000541259 UGT2B7P16662 529 aa9□□□□□ -0.97
DDX55-208ENST00000541259 CKMT2P17540 419 aa9□□□□□ -0.97
DDX55-208ENST00000541259 CD1CP29017 333 aa9□□□□□ -0.97
DDX55-208ENST00000541259 GPR3P46089 330 aa9□□□□□ -0.97
DDX55-208ENST00000541259 LSSP48449 732 aa9□□□□□ -0.97
DDX55-208ENST00000541259 SLC1A6P48664 564 aa9□□□□□ -0.97
DDX55-208ENST00000541259 PPM1FP49593 454 aaPredicted RBP9□□□□□ -0.97
DDX55-208ENST00000541259 EPHA4P54764 986 aa9□□□□□ -0.97
DDX55-208ENST00000541259 ABCE1P61221 599 aaKnown RBP9□□□□□ -0.97
DDX55-208ENST00000541259 CCL7P80098 99 aa9□□□□□ -0.97
DDX55-208ENST00000541259 ASPHQ12797 758 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms