RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 NUAK1O60285 661 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 LYPLA1O75608 230 aaPredicted RBP8.13□□□□□ -1.11
CHD4-208ENST00000540960 WFS1O76024 890 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 ANXA5P08758 320 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 NCF2P19878 526 aaPredicted RBP8.13□□□□□ -1.11
CHD4-208ENST00000540960 CYP2A7P20853 494 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 C5AR1P21730 350 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 MAP4P27816 1152 aaKnown RBP8.13□□□□□ -1.11
CHD4-208ENST00000540960 TEAD1P28347 426 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 MMP12P39900 470 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 PPP2CBP62714 309 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 PPP2CAP67775 309 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 MXRA7P84157 204 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 ZNF33BQ06732 778 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 DPTQ07507 201 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 DLG1Q12959 904 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 SQLEQ14534 574 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 ZNF460Q14592 562 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 PTPRCAPQ14761 206 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 ACOX1Q15067 660 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 PCBP2Q15366 365 aaKnown RBP eCLIP8.13□□□□□ -1.11
CHD4-208ENST00000540960 PFKFB4Q16877 469 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 SMU1Q2TAY7 513 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 TTC31Q49AM3 519 aaPredicted RBP8.13□□□□□ -1.11
CHD4-208ENST00000540960 TMEM52BQ4KMG9 183 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 CTSL3PQ5NE16 218 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 WASHC2DQ5SRD0 308 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 C10orf62Q5T681 223 aaPredicted RBP8.13□□□□□ -1.11
CHD4-208ENST00000540960 GPRC6AQ5T6X5 926 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 C16orf89Q6UX73 402 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 ERN2Q76MJ5 926 aaKnown RBP8.13□□□□□ -1.11
CHD4-208ENST00000540960 SPATA19Q7Z5L4 167 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 CUZD1Q86UP6 607 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 TEX9Q8N6V9 391 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 MFSD2AQ8NA29 543 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 CHST14Q8NCH0 376 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 RP9Q8TA86 221 aaKnown RBP8.13□□□□□ -1.11
CHD4-208ENST00000540960 MAGEC3Q8TD91 643 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 MCOLN3Q8TDD5 553 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 CXorf40AQ8TE69 158 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 GANCQ8TET4 914 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 CYB5D2Q8WUJ1 264 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 ANKRD49Q8WVL7 239 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 BTN2A2Q8WVV5 523 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 FUBP1Q96AE4 644 aaKnown RBP8.13□□□□□ -1.11
CHD4-208ENST00000540960 THOC1Q96FV9 657 aaKnown RBP8.13□□□□□ -1.11
CHD4-208ENST00000540960 NSMCE3Q96MG7 304 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 ZNF382Q96SR6 550 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 NMUR2Q9GZQ4 415 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 MEAF6Q9HAF1 191 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 SARS2Q9NP81 518 aaKnown RBP8.13□□□□□ -1.11
CHD4-208ENST00000540960 PNPOQ9NVS9 261 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 NLGN3Q9NZ94 848 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 DNMT3AQ9Y6K1 912 aaPredicted RBP8.13□□□□□ -1.11
CHD4-208ENST00000540960 ATRQ13535 2644 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 ACANP16112 2415 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 MN1Q10571 1320 aaPredicted RBP8.12□□□□□ -1.11
CHD4-208ENST00000540960 A0A1W2PP55 124 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 CAPN14A8MX76 684 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 C9orf172C9J069 976 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 DUX1O43812 170 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 KCNJ13O60928 360 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 NIPSNAP2O75323 286 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 PIAS2O75928 621 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 ESRRBO95718 433 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 RPN2P04844 631 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 RPS17P08708 135 aaKnown RBP8.12□□□□□ -1.11
CHD4-208ENST00000540960 SBK3P0C264 359 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 UROSP10746 265 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 LIFP15018 202 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 NUMBP49757 651 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 CLCQ05315 142 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 MAD2L1Q13257 205 aaPredicted RBP8.12□□□□□ -1.11
CHD4-208ENST00000540960 TGFBIQ15582 683 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 TSNQ15631 228 aaKnown RBP8.12□□□□□ -1.11
CHD4-208ENST00000540960 SNCBQ16143 134 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 GSTA3Q16772 222 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 POM121L1PQ3SYA9 428 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 SPATS1Q496A3 300 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 SYTL3Q4VX76 610 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 PRR30Q53SZ7 412 aaPredicted RBP8.12□□□□□ -1.11
CHD4-208ENST00000540960 C9orf64Q5T6V5 341 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 NXNQ6DKJ4 435 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 NEK5Q6P3R8 708 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 NAPRTQ6XQN6 538 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 RNF165Q6ZSG1 346 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 GPRIN3Q6ZVF9 776 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 PIM3Q86V86 326 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 GALNT13Q8IUC8 556 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 CPNE9Q8IYJ1 553 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 SIDT2Q8NBJ9 832 aaKnown RBP8.12□□□□□ -1.11
CHD4-208ENST00000540960 PDPRQ8NCN5 879 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 GPR26Q8NDV2 337 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 ZNF483Q8TF39 744 aaPredicted RBP8.12□□□□□ -1.11
CHD4-208ENST00000540960 TSPEARQ8WU66 669 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 UBTD2Q8WUN7 234 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 EEF1AKMT1Q8WVE0 214 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 USP7Q93009 1102 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 GLYATL1Q969I3 302 aa8.12□□□□□ -1.11
CHD4-208ENST00000540960 ATP6V1E2Q96A05 226 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms