RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 CCNDBP1O95273 360 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 ACSL3O95573 720 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 GUCA1CO95843 209 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 KLK3P07288 261 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 PRKAR1AP10644 381 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 STMN1P16949 149 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 TCN2P20062 427 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 F8A1P23610 371 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 ECHS1P30084 290 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 PHBP35232 272 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 SPRP35270 261 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 PRDX1Q06830 199 aaKnown RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 NAB1Q13506 487 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 NAA25Q14CX7 972 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 PTCHD3Q3KNS1 767 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 ZC3H12BQ5HYM0 836 aaKnown RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 UBAP2Q5T6F2 1119 aaKnown RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 GRTP1Q5TC63 336 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 ICE2Q659A1 982 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 AGTRAPQ6RW13 159 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 RELL1Q8IUW5 271 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 IFT20Q8IY31 132 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 SPATA6LQ8N4H0 392 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 ZNF655Q8N720 491 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 CT55Q8WUE5 264 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 SNRNP27Q8WVK2 155 aaKnown RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 ANKRD49Q8WVL7 239 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 STARD8Q92502 1023 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 MR1Q95460 341 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 ALKBH8Q96BT7 664 aaKnown RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 TSPAN17Q96FV3 270 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 PDLIM5Q96HC4 596 aaKnown RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 GPR22Q99680 433 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 DPH7Q9BTV6 452 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 EFHD1Q9BUP0 239 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 UNKQ9C0B0 810 aaKnown RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 ATG10Q9H0Y0 220 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 CDC42EP4Q9H3Q1 356 aaKnown RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 POPDC3Q9HBV1 291 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 SLC6A20Q9NP91 592 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 CCDC177Q9NQR7 707 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 UTP6Q9NYH9 597 aaKnown RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 NINJ2Q9NZG7 142 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 IKZF3Q9UKT9 509 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 NFU1Q9UMS0 254 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 PCDHB3Q9Y5E6 796 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 MRPS18BQ9Y676 258 aaKnown RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 AP1M2Q9Y6Q5 423 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 CFAP47Q6ZTR5 3102 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 IGKV1-8A0A0C4DH67 115 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 A0A0J9YVX5 310 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 OR2A25A4D2G3 310 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 C21orf140B9A014 251 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 H3BMH7 237 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 NKX2-8O15522 239 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 HBQ1P09105 142 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 CCDC166P0CW27 439 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 RORAP35398 523 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 AP1S2P56377 157 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 VSX2P58304 361 aaPredicted RBP8.85□□□□□ -0.99
SNHG1-215ENST00000540904 TBPL1P62380 186 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 ABATP80404 500 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 NAE1Q13564 534 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 DNASE1L3Q13609 305 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 SLMAPQ14BN4 828 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 UAP1Q16222 522 aaPredicted RBP8.85□□□□□ -0.99
SNHG1-215ENST00000540904 C1orf189Q5VU69 101 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 PRAMEF13Q5VWM6 474 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 FRMPD2BQ6IN97 320 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 LCN10Q6JVE6 187 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 C16orf46Q6P387 395 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 TLDC1Q6P9B6 456 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 SBSNQ6UWP8 590 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 RAPH1Q70E73 1250 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 ADCK2Q7Z695 626 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 LRRC56Q8IYG6 542 aaPredicted RBP8.85□□□□□ -0.99
SNHG1-215ENST00000540904 DSELQ8IZU8 1212 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 RNF166Q96A37 237 aaPredicted RBP8.85□□□□□ -0.99
SNHG1-215ENST00000540904 SLC45A3Q96JT2 553 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 LRFN5Q96NI6 719 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 RUFY1Q96T51 708 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 CYTH2Q99418 400 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 SELENOSQ9BQE4 189 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 PLCD4Q9BRC7 762 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 NDC1Q9BTX1 674 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 CHST8Q9H2A9 424 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 STARD5Q9NSY2 213 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 TXLNGQ9NUQ3 528 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 PCMTD2Q9NV79 361 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 DHCR7Q9UBM7 475 aaKnown RBP8.85□□□□□ -0.99
SNHG1-215ENST00000540904 CTNNAL1Q9UBT7 734 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 KCND3Q9UK17 655 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 KLK4Q9Y5K2 254 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 ADAMTS20P59510 1910 aa8.85□□□□□ -0.99
SNHG1-215ENST00000540904 DSPP15924 2871 aaKnown RBP8.84□□□□□ -0.99
SNHG1-215ENST00000540904 LOC105369274A0A096LPK9 316 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 LOC102723532A0A0G2JNH3 316 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 H7BY64 318 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 TERTO14746 1132 aaKnown RBP8.84□□□□□ -0.99
SNHG1-215ENST00000540904 EIF2S1P05198 315 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms