RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 PCBP2Q15366 365 aaKnown RBP eCLIP10.26□□□□□ -0.77
ATL3-204ENST00000540699 SYTL3Q4VX76 610 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 CCDC157Q569K6 752 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 CFAP157Q5JU67 520 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 DHRS13Q6UX07 377 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 TMPRSS7Q7RTY8 843 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 TMPRSS12Q86WS5 348 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 TRIM48Q8IWZ4 208 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 DCBLD1Q8N8Z6 715 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 STON2Q8WXE9 905 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 TFGQ92734 400 aaPredicted RBP10.26□□□□□ -0.77
ATL3-204ENST00000540699 RHBDF1Q96CC6 855 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 NSUN5Q96P11 429 aaKnown RBP10.26□□□□□ -0.77
ATL3-204ENST00000540699 TMEM79Q9BSE2 394 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 TMEM120AQ9BXJ8 343 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 TWSG1Q9GZX9 223 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 ILKAPQ9H0C8 392 aaPredicted RBP10.26□□□□□ -0.77
ATL3-204ENST00000540699 LRRN3Q9H3W5 708 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 KIR3DX1Q9H7L2 352 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 MVB12BQ9H7P6 319 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 TNFRSF12AQ9NP84 129 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 IMP3Q9NV31 184 aaKnown RBP10.26□□□□□ -0.77
ATL3-204ENST00000540699 CD274Q9NZQ7 290 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 ZDHHC2Q9UIJ5 367 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 DCTN4Q9UJW0 460 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 PCTPQ9UKL6 214 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 PDE10AQ9Y233 779 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 ASB1Q9Y576 335 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 URB1O60287 2271 aaKnown RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 PRAMEF33A0A0G2JMD5 474 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 A0A0G2JND7 137 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 ERICH4A6NGS2 130 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 NCF1BA6NI72 391 aaPredicted RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 NCF1CA8MVU1 366 aaPredicted RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 MATN2O00339 956 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 IFRD1O00458 451 aaPredicted RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 EBAG9O00559 213 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 E2F3O00716 465 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 TAPBPO15533 448 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 SUPT7LO94864 414 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 RPLP0P05388 317 aaKnown RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 KITP10721 976 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 NCF1P14598 390 aaPredicted RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 AGTR2P50052 363 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 RPL14P50914 215 aaKnown RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 ARFIP2P53365 341 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 OR1D5P58170 312 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 CFHR1Q03591 330 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 CLCQ05315 142 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 BIRC2Q13490 618 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 TUBB3Q13509 450 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 SOWAHCQ53LP3 525 aaPredicted RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 HES3Q5TGS1 186 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 ANKS6Q68DC2 871 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 SULT1C3Q6IMI6 304 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 METTL2BQ6P1Q9 378 aaKnown RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 DUS1LQ6P1R4 473 aaKnown RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 UNC5DQ6UXZ4 953 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 FRA10AC1Q70Z53 315 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 UBE2R2Q712K3 238 aaPredicted RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 ZNF771Q7L3S4 317 aaPredicted RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 CUZD1Q86UP6 607 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 WDR75Q8IWA0 830 aaKnown RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 TBC1D21Q8IYX1 336 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 GALNT15Q8N3T1 639 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 FBXO15Q8NCQ5 510 aaPredicted RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 OR5K2Q8NHB8 316 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 SLC38A3Q99624 504 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 DPYSL5Q9BPU6 564 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 TBC1D10AQ9BXI6 508 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 PARVBQ9HBI1 364 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 EML4Q9HC35 981 aaKnown RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 ZBTB26Q9HCK0 441 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 ABCF3Q9NUQ8 709 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 UTP6Q9NYH9 597 aaKnown RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 PDP2Q9P2J9 529 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 CFAP20Q9Y6A4 193 aaKnown RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 COLEC10Q9Y6Z7 277 aa10.25□□□□□ -0.77
ATL3-204ENST00000540699 GCN1Q92616 2671 aaKnown RBP10.25□□□□□ -0.77
ATL3-204ENST00000540699 CCT8L1PA6NM43 557 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 ARHGEF33A8MVX0 844 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 D6RAR5 112 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 PPP6CO00743 305 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 DUX1O43812 170 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 CPNE6O95741 557 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 S100BP04271 92 aaPredicted RBP10.24□□□□□ -0.77
ATL3-204ENST00000540699 CYP2A7P20853 494 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 ALDH4A1P30038 563 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 CSF2RBP32927 897 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 GGT5P36269 586 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 MAPK9P45984 424 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 PDX1P52945 283 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 AQP5P55064 265 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 CDH13P55290 713 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 AP1S2P56377 157 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 LCP2Q13094 533 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 SPIDRQ14159 915 aa10.24□□□□□ -0.77
ATL3-204ENST00000540699 ZXDCQ2QGD7 858 aaPredicted RBP10.24□□□□□ -0.77
ATL3-204ENST00000540699 C18orf21Q32NC0 220 aaPredicted RBP10.24□□□□□ -0.77
ATL3-204ENST00000540699 FBXO48Q5FWF7 155 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms