RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 HCFC1R1Q9NWW0 138 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 TAS2R16Q9NYV7 291 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 A0A096LPI6 279 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 E7EQ34 232 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 NEDD8-MDP1E9PL57 170 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 FZD6O60353 706 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 CLPXO76031 633 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 IL6P05231 212 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 C21orf33P30042 268 aaPredicted RBP13.71□□□□□ -0.21
INO80E-203ENST00000540562 ETV3P41162 512 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 MAGEA10P43363 369 aaPredicted RBP13.71□□□□□ -0.21
INO80E-203ENST00000540562 KIR3DL1P43629 444 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 SREBF2Q12772 1141 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 NAE1Q13564 534 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 B3GNT8Q7Z7M8 397 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 PIK3C3Q8NEB9 887 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 TSPEARQ8WU66 669 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 RORBQ92753 470 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 PLD4Q96BZ4 506 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 HSH2DQ96JZ2 352 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 HERC2P3Q9BVR0 1158 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 ATP13A3Q9H7F0 1226 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 CHCHD3Q9NX63 227 aaKnown RBP13.71□□□□□ -0.21
INO80E-203ENST00000540562 B4GALT6Q9UBX8 382 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 ITM2BQ9Y287 266 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 MICAL3Q7RTP6 2002 aa13.71□□□□□ -0.21
INO80E-203ENST00000540562 SLC28A1O00337 649 aa13.71□□□□□ -0.22
INO80E-203ENST00000540562 ETHE1O95571 254 aa13.71□□□□□ -0.22
INO80E-203ENST00000540562 PTSQ03393 145 aa13.71□□□□□ -0.22
INO80E-203ENST00000540562 TCEA2Q15560 299 aa13.71□□□□□ -0.22
INO80E-203ENST00000540562 Q6ZNX1 250 aa13.71□□□□□ -0.22
INO80E-203ENST00000540562 ADCK1Q86TW2 530 aa13.71□□□□□ -0.22
INO80E-203ENST00000540562 UTP15Q8TED0 518 aaKnown RBP13.71□□□□□ -0.22
INO80E-203ENST00000540562 PYURFQ96I23 114 aa13.71□□□□□ -0.22
INO80E-203ENST00000540562 SAMD11Q96NU1 681 aa13.71□□□□□ -0.22
INO80E-203ENST00000540562 CORO1BQ9BR76 489 aa13.71□□□□□ -0.22
INO80E-203ENST00000540562 FAIMQ9NVQ4 179 aa13.71□□□□□ -0.22
INO80E-203ENST00000540562 ZNF639Q9UID6 485 aa13.71□□□□□ -0.22
INO80E-203ENST00000540562 SCN5AQ14524 2016 aa13.71□□□□□ -0.22
INO80E-203ENST00000540562 PLXNA4Q9HCM2 1894 aa13.71□□□□□ -0.22
INO80E-203ENST00000540562 FUOMA2VDF0 154 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 C16orf96A6NNT2 1141 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 EVPLLA8MZ36 301 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 H0YAE9 185 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 ARNTLO00327 626 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 SEC14L2O76054 403 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 SERPINA4P29622 427 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 ADPRMQ3LIE5 342 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.7□□□□□ -0.22
INO80E-203ENST00000540562 SLC16A12Q6ZSM3 486 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 CLIP4Q8N3C7 705 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 HJURPQ8NCD3 748 aaPredicted RBP13.7□□□□□ -0.22
INO80E-203ENST00000540562 PSMA8Q8TAA3 256 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 HTRA1Q92743 480 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 COX4I2Q96KJ9 171 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 PRKAB1Q9Y478 270 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 PTGER1P34995 402 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 CRATP43155 626 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 CLK3P49761 638 aaKnown RBP13.7□□□□□ -0.22
INO80E-203ENST00000540562 GRIK2Q13002 908 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 SLC13A2Q13183 592 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 SKIV2LQ15477 1246 aaKnown RBP13.7□□□□□ -0.22
INO80E-203ENST00000540562 RGS21Q2M5E4 152 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 CERS6Q6ZMG9 384 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 ZNF852Q6ZMS4 543 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 DSG4Q86SJ6 1040 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 TTC29Q8NA56 475 aaPredicted RBP13.7□□□□□ -0.22
INO80E-203ENST00000540562 IGSF21Q96ID5 467 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 MUC13Q9H3R2 512 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 SLC32A1Q9H598 525 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 THG1LQ9NWX6 298 aaKnown RBP13.7□□□□□ -0.22
INO80E-203ENST00000540562 MTRRQ9UBK8 725 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 SLC6A14Q9UN76 642 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 ATG2BQ96BY7 2078 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 SCN4AP35499 1836 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 REV3LO60673 3130 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 LINC00854A0A1B0GVQ3 168 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 FAM227AF5H4B4 570 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 PLK4O00444 970 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 CHRM5P08912 532 aaPredicted RBP13.7□□□□□ -0.22
INO80E-203ENST00000540562 CD22P20273 847 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 POU1F1P28069 291 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 HLA-FP30511 346 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 MC1RQ01726 317 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 CREMQ03060 361 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 CBX3Q13185 183 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 BTG3Q14201 252 aaPredicted RBP13.7□□□□□ -0.22
INO80E-203ENST00000540562 GANABQ14697 944 aaKnown RBP13.7□□□□□ -0.22
INO80E-203ENST00000540562 TTLL9Q3SXZ7 439 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 CPZQ66K79 652 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 SLC8B1Q6J4K2 584 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 NOXRED1Q6NXP6 359 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 GAREM2Q75VX8 874 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 PAGE2Q7Z2X7 111 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 CPPED1Q9BRF8 314 aaPredicted RBP13.7□□□□□ -0.22
INO80E-203ENST00000540562 TTLL2Q9BWV7 592 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 C6orf62Q9GZU0 229 aaPredicted RBP13.7□□□□□ -0.22
INO80E-203ENST00000540562 TRIM39Q9HCM9 518 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 ABCB10Q9NRK6 738 aa13.7□□□□□ -0.22
INO80E-203ENST00000540562 KRT84Q9NSB2 600 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms