RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 TMEM132CQ8N3T6 1108 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 GLB1L3Q8NCI6 653 aaPredicted RBP13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 ULK4Q96C45 1275 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 MS4A4AQ96JQ5 239 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 TTPALQ9BTX7 342 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 GABARAPL1Q9H0R8 117 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 KCNH6Q9H252 994 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 TM9SF3Q9HD45 589 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 FBXL12Q9NXK8 326 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 PRG3Q9Y2Y8 225 aaPredicted RBP13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 ISPDA4D126 451 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 A8MX80 341 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 ESR1P03372 595 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 NTRK1P04629 796 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 NUDT7P0C024 238 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 HOXB9P17482 250 aaPredicted RBP13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 CR2P20023 1033 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 TNFRSF1BP20333 461 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 PTGER3P43115 390 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 CTSKP43235 329 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 TWF1Q12792 350 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 DOC2BQ14184 412 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 SF1Q15637 639 aaKnown RBP13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 PROX2Q3B8N5 592 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 LRIF1Q5T3J3 769 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 CXCL17Q6UXB2 119 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 EBPLQ9BY08 206 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 CD244Q9BZW8 370 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 CRISPLD1Q9H336 500 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 RAD18Q9NS91 495 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 SNX8Q9Y5X2 465 aa13.54□□□□□ -0.24
SCNN1A-215ENST00000540037 RFXANKO14593 260 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 ERN1O75460 977 aaKnown RBP13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 SLC25A14O95258 325 aaPredicted RBP13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 STSP08842 583 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 FPR1P21462 350 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 CLCN4P51793 760 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 CASP9P55211 416 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 ARHGEF7Q14155 803 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 SPRYD7Q5W111 196 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 TRIM46Q7Z4K8 759 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 IL17RDQ8NFM7 739 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 ADAM2Q99965 735 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 KCNS3Q9BQ31 491 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 HTTP42858 3142 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 SLC28A1O00337 649 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 CTDSP2O14595 271 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 MFN2O95140 757 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 CCNDBP1O95273 360 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 CPT1AP50416 773 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 SEMG2Q02383 582 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 ABHD18Q0P651 414 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 C16orf59Q7L2K0 433 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 P3H2Q8IVL5 708 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 OR6K2Q8NGY2 324 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 APIPQ96GX9 242 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 DMRTB1Q96MA1 342 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 ROGDIQ9GZN7 287 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 AFF4Q9UHB7 1163 aaKnown RBP13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 SAMD4AQ9UPU9 718 aaKnown RBP13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 N6AMT1Q9Y5N5 214 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 A0A1W2PQ67 120 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 F5H5T6 163 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 CYP7B1O75881 506 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 PTHP01270 115 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 ADRA2AP08913 450 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 EPORP19235 508 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 MAPKAPK2P49137 400 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 MRPL10Q7Z7H8 261 aaKnown RBP13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 TCAIMQ8N3R3 496 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 C17orf50Q8WW18 174 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 GGHQ92820 318 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 MAL2Q969L2 176 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 NEDD4LQ96PU5 975 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 SDHCQ99643 169 aaPredicted RBP13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 FBXO44Q9H4M3 255 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 RUBCNLQ9H714 662 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 CCNB1IP1Q9NPC3 277 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 RLIMQ9NVW2 624 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 VPS9D1Q9Y2B5 631 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 PCDHB9Q9Y5E1 797 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 PCDHGB6Q9Y5F9 930 aa13.53□□□□□ -0.24
SCNN1A-215ENST00000540037 PIKFYVEQ9Y2I7 2098 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 LINC00854A0A1B0GVQ3 168 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 TAF4O00268 1085 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 WNT9AO14904 365 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 HAT1O14929 419 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 KCNK5O95279 499 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 F11P03951 625 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 PTPN2P17706 415 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 ENGP17813 658 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 SDC1P18827 310 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 IDH2P48735 452 aaKnown RBP13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 MAD2L1Q13257 205 aaPredicted RBP13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 ZXDCQ2QGD7 858 aaPredicted RBP13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 PNCKQ6P2M8 343 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 SERPINA9Q86WD7 417 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 OR52J3Q8NH60 311 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 CDC26Q8NHZ8 85 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 AP5M1Q9H0R1 490 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms