RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 PRSS21Q9Y6M0 314 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 MYO7BQ6PIF6 2116 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 CCDC168Q8NDH2 2452 aa14.36□□□□□ -0.11
USB1-203ENST00000539737 NUP210LQ5VU65 1888 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 SETD2Q9BYW2 2564 aaPredicted RBP14.35□□□□□ -0.11
USB1-203ENST00000539737 H3BMM5 538 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 OR2B3O76000 313 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 SNRPB2P08579 225 aaKnown RBP14.35□□□□□ -0.11
USB1-203ENST00000539737 TPBGLP0DKB5 382 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 ITGAXP20702 1163 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 ITGA3P26006 1051 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 GABRA4P48169 554 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 MRPS25P82663 173 aaKnown RBP14.35□□□□□ -0.11
USB1-203ENST00000539737 CAV1Q03135 178 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 BRD3Q15059 726 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 TMED2Q15363 201 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 ZNF658BQ4V348 819 aaPredicted RBP14.35□□□□□ -0.11
USB1-203ENST00000539737 MSS51Q4VC12 460 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 DUPD1Q68J44 220 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 PTRHD1Q6GMV3 140 aaKnown RBP14.35□□□□□ -0.11
USB1-203ENST00000539737 LDB1Q86U70 411 aaPredicted RBP14.35□□□□□ -0.11
USB1-203ENST00000539737 FJX1Q86VR8 437 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 CLEC1AQ8NC01 280 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 GRHL3Q8TE85 626 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 ELMO1Q92556 727 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 TFGQ92734 400 aaPredicted RBP14.35□□□□□ -0.11
USB1-203ENST00000539737 PANX3Q96QZ0 392 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 BARD1Q99728 777 aaKnown RBP14.35□□□□□ -0.11
USB1-203ENST00000539737 OR52A5Q9H2C5 316 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 SLC6A20Q9NP91 592 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 C20orf96Q9NUD7 363 aaPredicted RBP14.35□□□□□ -0.11
USB1-203ENST00000539737 C5AR2Q9P296 337 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 SERTAD3Q9UJW9 196 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 FAM169AQ9Y6X4 670 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 ZFHX3Q15911 3703 aa14.35□□□□□ -0.11
USB1-203ENST00000539737 PCM1Q15154 2024 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 CTAGE15A4D2H0 777 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 C2orf74A8MZ97 194 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 GOLGA8KD6RF30 607 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 GOLGA8TH3BQL2 631 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 BANF1O75531 89 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 KRT38O76015 456 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 ESR1P03372 595 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 CTAGE8P0CG41 777 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 UGT2B7P16662 529 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 AGXTP21549 392 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 ADARP55265 1226 aaKnown RBP14.34□□□□□ -0.11
USB1-203ENST00000539737 EIF3BP55884 814 aaKnown RBP14.34□□□□□ -0.11
USB1-203ENST00000539737 BOP1Q14137 746 aaKnown RBP14.34□□□□□ -0.11
USB1-203ENST00000539737 CENPUQ71F23 418 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 CTAGE6Q86UF2 777 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 AMIGO1Q86WK6 493 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 CTAGE4Q8IX94 777 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 PARP9Q8IXQ6 854 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 ZADH2Q8N4Q0 377 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 C2orf73Q8N5S3 287 aaPredicted RBP14.34□□□□□ -0.11
USB1-203ENST00000539737 C19orf47Q8N9M1 422 aaKnown RBP14.34□□□□□ -0.11
USB1-203ENST00000539737 CATSPER1Q8NEC5 780 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 OR5AR1Q8NGP9 310 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 LPGAT1Q92604 370 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 CARD6Q9BX69 1037 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 PHACTR1Q9C0D0 580 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 P2RY12Q9H244 342 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 TFB2MQ9H5Q4 396 aaKnown RBP14.34□□□□□ -0.11
USB1-203ENST00000539737 IRAK4Q9NWZ3 460 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 IFT80Q9P2H3 777 aaPredicted RBP14.34□□□□□ -0.11
USB1-203ENST00000539737 ZC3H7BQ9UGR2 993 aaKnown RBP14.34□□□□□ -0.11
USB1-203ENST00000539737 POLG2Q9UHN1 485 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 GPN3Q9UHW5 284 aaPredicted RBP14.34□□□□□ -0.11
USB1-203ENST00000539737 FBXL4Q9UKA2 621 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 CHMP2BQ9UQN3 213 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 ASF1AQ9Y294 204 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 PADI2Q9Y2J8 665 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 PKDREJQ9NTG1 2253 aa14.34□□□□□ -0.11
USB1-203ENST00000539737 PRSS44E7EML9 344 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 E7ESA3 106 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 PEX12O00623 359 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 TP73O15350 636 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 EIF3HO15372 352 aaKnown RBP eCLIP14.33□□□□□ -0.12
USB1-203ENST00000539737 MCM3P25205 808 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 ELAVL4P26378 380 aaKnown RBP14.33□□□□□ -0.12
USB1-203ENST00000539737 PEBP1P30086 187 aaKnown RBP14.33□□□□□ -0.12
USB1-203ENST00000539737 ELK3P41970 407 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 KCNK10P57789 538 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 PDIA2Q13087 525 aaKnown RBP14.33□□□□□ -0.12
USB1-203ENST00000539737 CBLBQ13191 982 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 FRG1Q14331 258 aaKnown RBP14.33□□□□□ -0.12
USB1-203ENST00000539737 SSPNQ14714 243 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 ZRSR2Q15696 482 aaKnown RBP14.33□□□□□ -0.12
USB1-203ENST00000539737 STEAP4Q687X5 459 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 SP5Q6BEB4 398 aaPredicted RBP14.33□□□□□ -0.12
USB1-203ENST00000539737 SPESP1Q6UW49 350 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 IGFL3Q6UXB1 125 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 MCEMP1Q8IX19 187 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 MMGT1Q8N4V1 131 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 CEP112Q8N8E3 955 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 ST6GALNAC3Q8NDV1 305 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 FLVCR1-AS1Q8TAF5 88 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 CFAP36Q96G28 342 aa14.33□□□□□ -0.12
USB1-203ENST00000539737 FER1L6-AS2Q96M78 137 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms